RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 TRIM36Q9NQ86 728 aa12.14□□□□□ -0.47
DNMT3A-207ENST00000461228 CLN8Q9UBY8 286 aa12.14□□□□□ -0.47
DNMT3A-207ENST00000461228 A4GNTQ9UNA3 340 aa12.14□□□□□ -0.47
DNMT3A-207ENST00000461228 NOP16Q9Y3C1 178 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-207ENST00000461228 PRSS37A4D1T9 235 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 P2RY10O00398 339 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 XKRYO14609 159 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 CLPXO76031 633 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 PTBP3O95758 552 aaKnown RBP12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 CD14P08571 375 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 IFI30P13284 250 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 SELEP16581 610 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 PRKCDQ05655 676 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 LAPTM4AQ15012 233 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 KCNJ8Q15842 424 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 KCNMB1Q16558 191 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 MESTQ5EB52 335 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 NANOGP8Q6NSW7 305 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 BRICD5Q6PL45 260 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 COLCA1Q6ZS62 124 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 RHOUQ7L0Q8 258 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 OAFQ86UD1 273 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 OR10S1Q8NGN2 331 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 DMRTB1Q96MA1 342 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 ZNF582Q96NG8 517 aaPredicted RBP12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 COQ7Q99807 217 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 NUDT16L1Q9BRJ7 211 aaKnown RBP12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 TMEM246Q9BRR3 403 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 C1RLQ9NZP8 487 aa12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 PDP1Q9P0J1 537 aaPredicted RBP12.13□□□□□ -0.47
DNMT3A-207ENST00000461228 FAM220BPB1ANY3 271 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 MLNRO43193 412 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 PIP5K1CO60331 668 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 CRYBA1P05813 215 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 MMP9P14780 707 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 CD200P41217 278 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 RAD23AP54725 363 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 HIST1H3AP68431 136 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 RELBQ01201 579 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 DEFB112Q30KQ8 113 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 KRTAP27-1Q3LI81 207 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 HIST2H3PS2Q5TEC6 136 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 CD276Q5ZPR3 534 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 WDR25Q64LD2 544 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 GPR139Q6DWJ6 353 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 TMPRSS11FQ6ZWK6 438 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 HIST2H3AQ71DI3 136 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 GLB1L2Q8IW92 636 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 PLPP7Q8NBV4 271 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 OR10AD1Q8NGE0 317 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 OR1F12Q8NHA8 337 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 ACOT11Q8WXI4 607 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 VSX1Q9NZR4 365 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 ASH2LQ9UBL3 628 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 GRHPRQ9UBQ7 328 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 TMEM5Q9Y2B1 443 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 STARD10Q9Y365 291 aa12.12□□□□□ -0.47
DNMT3A-207ENST00000461228 DNAH3Q8TD57 4116 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 TRAV27A0A087WT01 109 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 MELTFP08582 738 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 CTLA4P16410 223 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 SDHAP31040 664 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 ERFP50548 548 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 SELENOWP63302 87 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 TRAM2Q15035 370 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 CYBRD1Q53TN4 286 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 FIP1L1Q6UN15 594 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 ZNF841Q6ZN19 808 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 ZNF620Q6ZNG0 422 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 NRMQ8IXM6 262 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 GATAD2BQ8WXI9 593 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 LRTOMTQ8WZ04 291 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 LZICQ8WZA0 190 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 ZNF570Q96NI8 536 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 ECSITQ9BQ95 431 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 CHIAQ9BZP6 476 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 SLC22A4Q9H015 551 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 EMC7Q9NPA0 242 aa12.11□□□□□ -0.47
DNMT3A-207ENST00000461228 KMT2CQ8NEZ4 4911 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 MDFIC2A0A1B0GVS7 189 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 SLC22A31A6NKX4 558 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 EFCAB9A8MZ26 197 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 ZNF879B4DU55 563 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 FBP2O00757 339 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 GPANK1O95872 356 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 IFNW1P05000 195 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 SCG5P05408 212 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 IRF2P14316 349 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 TNFRSF1BP20333 461 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 CFHR2P36980 270 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 PROK1P58294 105 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 FGF12P61328 243 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 COX10Q12887 443 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 KRR1Q13601 381 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 TTMPQ5BVD1 217 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 RABL3Q5HYI8 236 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 BRD3OSQ6XYD6 125 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 MBOAT2Q6ZWT7 520 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 OR13C2Q8NGS9 318 aa12.1□□□□□ -0.47
DNMT3A-207ENST00000461228 ZDHHC16Q969W1 377 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms