RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 STOMP27105 288 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 HTR2AP28223 471 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 MDH2P40926 338 aaKnown RBP14.44□□□□□ -0.1
TOP3A-202ENST00000461127 ZNF84P51523 738 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 TAS2R41P59536 307 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 SPIBQ01892 262 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 NPTX1Q15818 432 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 C2orf68Q2NKX9 166 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 OR2T5Q6IEZ7 315 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 ZNF283Q8N7M2 679 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 OR2T29Q8NH02 315 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 OR5J2Q8NH18 312 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 SLC25A40Q8TBP6 338 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 FAM71F1Q96KD3 344 aaPredicted RBP14.44□□□□□ -0.1
TOP3A-202ENST00000461127 WFDC6Q9BQY6 131 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 SSBP3Q9BWW4 388 aaPredicted RBP14.44□□□□□ -0.1
TOP3A-202ENST00000461127 CHIAQ9BZP6 476 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 OR2J1Q9GZK6 312 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 REEP1Q9H902 201 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 TMEM27Q9HBJ8 222 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 STX18Q9P2W9 335 aaKnown RBP14.44□□□□□ -0.1
TOP3A-202ENST00000461127 ASH2LQ9UBL3 628 aa14.44□□□□□ -0.1
TOP3A-202ENST00000461127 CPSF4LA6NMK7 179 aaKnown RBP14.43□□□□□ -0.1
TOP3A-202ENST00000461127 H3BSA7 217 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 E2F6O75461 281 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 CLPXO76031 633 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 QDPRP09417 244 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 SMIM11AP58511 58 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 KRTAP10-3P60369 221 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 SLC34A1Q06495 639 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 ZMYND11Q15326 602 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 PABPC1L2AQ5JQF8 200 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 GPR157Q5UAW9 335 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 BRD3OSQ6XYD6 125 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 ZNF620Q6ZNG0 422 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 REC114Q7Z4M0 266 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 ZER1Q7Z7L7 766 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 AMIGO2Q86SJ2 522 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 ZNF101Q8IZC7 436 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 LRRC18Q8N456 261 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 RAB40AQ8WXH6 277 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 CENPNQ96H22 339 aaPredicted RBP14.43□□□□□ -0.1
TOP3A-202ENST00000461127 PRRC1Q96M27 445 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 FNDC11Q9BVV2 318 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 POLR2J2Q9GZM3 115 aaKnown RBP14.43□□□□□ -0.1
TOP3A-202ENST00000461127 POLR2J3Q9H1A7 115 aaKnown RBP14.43□□□□□ -0.1
TOP3A-202ENST00000461127 MSL2Q9HCI7 577 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 CCNB1IP1Q9NPC3 277 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 POMT1Q9Y6A1 747 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 DOCK11Q5JSL3 2073 aa14.43□□□□□ -0.1
TOP3A-202ENST00000461127 IGHV2-70DA0A0C4DH43 119 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 C5orf49A4QMS7 147 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 LRRN3E7EW58 273 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 J3KTA2 159 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 OR5F1O95221 314 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 GDI2P50395 445 aaKnown RBP14.42□□□□□ -0.1
TOP3A-202ENST00000461127 CDH12P55289 794 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 SPRNQ5BIV9 151 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 ENTPD8Q5MY95 495 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 Q6YL49 198 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 TSEN54Q7Z6J9 526 aaKnown RBP14.42□□□□□ -0.1
TOP3A-202ENST00000461127 ABHD4Q8TB40 342 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 PLEKHA8Q96JA3 519 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 SAMD8Q96LT4 415 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 TMEM43Q9BTV4 400 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 SEMA6AQ9H2E6 1030 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 RHCGQ9UBD6 479 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 NKX1-2Q9UD57 310 aaPredicted RBP14.42□□□□□ -0.1
TOP3A-202ENST00000461127 KLHL21Q9UJP4 597 aa14.42□□□□□ -0.1
TOP3A-202ENST00000461127 SAMHD1Q9Y3Z3 626 aaKnown RBP14.42□□□□□ -0.1
TOP3A-202ENST00000461127 TRAPPC13A5PLN9 417 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 CEACAM18A8MTB9 384 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 TNFRSF11BO00300 401 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 RNF13O43567 381 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 TIMM8AO60220 97 aaPredicted RBP14.41□□□□□ -0.1
TOP3A-202ENST00000461127 IGHG1P01857 330 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 H1F0P07305 194 aaKnown RBP14.41□□□□□ -0.1
TOP3A-202ENST00000461127 MMP7P09237 267 aaPredicted RBP14.41□□□□□ -0.1
TOP3A-202ENST00000461127 WNT2P09544 360 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 PGA4P0DJD7 388 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 PGA3P0DJD8 388 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 RPS2P15880 293 aaKnown RBP14.41□□□□□ -0.1
TOP3A-202ENST00000461127 RRM2P31350 389 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 WNT5AP41221 380 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 CLRN1P58418 232 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 PPP1CBP62140 327 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 GNB2P62879 340 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 PAX2Q02962 417 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 PIN1Q13526 163 aaPredicted RBP14.41□□□□□ -0.1
TOP3A-202ENST00000461127 OR1Q1Q15612 314 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 BEAN1Q3B7T3 259 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 TMEM255AQ5JRV8 349 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 FGD3Q5JSP0 725 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 Q6ZPA2 131 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 OFCC1Q8IZS5 231 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 LINC01006Q8NI28 216 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 SSMEM1Q8WWF3 244 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 DYRK2Q92630 601 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 KIF17Q9P2E2 1029 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 RIMS3Q9UJD0 308 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms