RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 C1orf174Q8IYL3 243 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 ZCCHC24Q8N2G6 241 aaKnown RBP17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 SYNPRQ8TBG9 265 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 SLC25A40Q8TBP6 338 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 ST7LQ8TDW4 575 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 ZMYND19Q96E35 227 aaPredicted RBP17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 ATF6BQ99941 703 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 TMUB1Q9BVT8 246 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 OR2J1Q9GZK6 312 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 BARX1Q9HBU1 254 aaPredicted RBP17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 DDX28Q9NUL7 540 aaKnown RBP17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 DUSP13Q9UII6 198 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 GRIP1Q9Y3R0 1128 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 CHD3Q12873 2000 aaKnown RBP17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 ACANP16112 2415 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 IGHV3-13P01766 116 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 SPARCP09486 303 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 KLF3P57682 345 aaPredicted RBP17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 ECH1Q13011 328 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 KLHL12Q53G59 568 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 MBNL2Q5VZF2 373 aaKnown RBP17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 UNQ6126/PRO20091Q6UXV3 157 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 DPY19L4Q7Z388 723 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 ERI1Q8IV48 349 aaKnown RBP17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 KLF14Q8TD94 323 aaPredicted RBP17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 STMN2Q93045 179 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 Q96MF0 132 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 INTS14Q96SY0 518 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 SLC29A1Q99808 456 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 C9orf16Q9BUW7 83 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 PRRG3Q9BZD7 231 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 POFUT1Q9H488 388 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 RIBC2Q9H4K1 309 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 STARD10Q9Y365 291 aa17.66■□□□□ 0.42
RPUSD3-210ENST00000460909 CCDC182A6NF36 153 aa17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 TLX2O43763 284 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 F12P00748 615 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 ADRA2AP08913 450 aa17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 MPV17P39210 176 aa17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 ALDH3B1P43353 468 aa17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 EFNA4P52798 201 aa17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 APOFQ13790 326 aa17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 MAD2L1BPQ15013 274 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 ZNF718Q3SXZ3 478 aa17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 COLCA1Q6ZS62 124 aa17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 TCEANCQ8N8B7 351 aa17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 TMEM163Q8TC26 289 aa17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 TEAD3Q99594 435 aa17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 VRK1Q99986 396 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 MED13LQ71F56 2210 aa17.65■□□□□ 0.42
RPUSD3-210ENST00000460909 H3BSA7 217 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 J3QW42 95 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 M0R233 179 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 SELENOFO60613 162 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 LY6HO94772 140 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 BAG2O95816 211 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 ACSM4P0C7M7 580 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 TUBG1P23258 451 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 OTX1P32242 354 aaPredicted RBP17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 CLEC12BQ2HXU8 276 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 AADACL4Q5VUY2 407 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 BCDIN3DQ7Z5W3 292 aaKnown RBP17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 OR6N2Q8NGY6 317 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 IPCEF1Q8WWN9 437 aaPredicted RBP17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 SLAMF6Q96DU3 332 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 AMELYQ99218 206 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 DLL4Q9NR61 685 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 TUBG2Q9NRH3 451 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 TAAR3PQ9P1P4 343 aa17.64■□□□□ 0.41
RPUSD3-210ENST00000460909 TEP1Q99973 2627 aaKnown RBP17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 F5H5K5 113 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 SSX4O60224 188 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 RGS6P49758 472 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 NUDT6P53370 316 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 RAD23AP54725 363 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 SELENOVP59797 346 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 ZBTB49Q6ZSB9 765 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 NAA40Q86UY6 237 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 HRASLS5Q96KN8 279 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 IL4I1Q96RQ9 567 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 ABHD6Q9BV23 337 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 C1QTNF5Q9BXJ0 243 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 RAB1BQ9H0U4 201 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 MS4A5Q9H3V2 200 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 DYNLRB1Q9NP97 96 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 SLCO1C1Q9NYB5 712 aa17.63■□□□□ 0.41
RPUSD3-210ENST00000460909 A0A1W2PPW3 197 aa17.62■□□□□ 0.41
RPUSD3-210ENST00000460909 TRIM64A6NGJ6 449 aa17.62■□□□□ 0.41
RPUSD3-210ENST00000460909 TRIM64BA6NI03 449 aa17.62■□□□□ 0.41
RPUSD3-210ENST00000460909 GCH1P30793 250 aa17.62■□□□□ 0.41
RPUSD3-210ENST00000460909 RPS7P62081 194 aaKnown RBP17.62■□□□□ 0.41
RPUSD3-210ENST00000460909 PSG7Q13046 419 aa17.62■□□□□ 0.41
RPUSD3-210ENST00000460909 EIF2B1Q14232 305 aaKnown RBP17.62■□□□□ 0.41
RPUSD3-210ENST00000460909 ZIK1Q3SY52 487 aaPredicted RBP17.62■□□□□ 0.41
RPUSD3-210ENST00000460909 NXNL2Q5VZ03 156 aa17.62■□□□□ 0.41
RPUSD3-210ENST00000460909 MEPCEQ7L2J0 689 aaKnown RBP17.62■□□□□ 0.41
RPUSD3-210ENST00000460909 SHFQ7M4L6 423 aa17.62■□□□□ 0.41
RPUSD3-210ENST00000460909 LURAP1LQ8IV03 231 aa17.62■□□□□ 0.41
RPUSD3-210ENST00000460909 ZNF525Q8N782 197 aa17.62■□□□□ 0.41
RPUSD3-210ENST00000460909 OTOSQ8NHW6 89 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms