RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 RAB26Q9ULW5 256 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 EP300Q09472 2414 aaPredicted RBP2.09□□□□□ -2.08
RFC4-211ENST00000460408 CEP250Q9BV73 2442 aa2.09□□□□□ -2.08
RFC4-211ENST00000460408 KTN1Q86UP2 1357 aaKnown RBP2.09□□□□□ -2.08
RFC4-211ENST00000460408 ALPK3Q96L96 1907 aa2.09□□□□□ -2.08
RFC4-211ENST00000460408 BPTFQ12830 3046 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 ANKRD31Q8N7Z5 1873 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 IGLV11-55A0A075B6I3 123 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 IGKV6D-21A0A0A0MT36 114 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 A0A0B4J2A0 478 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 CCL15-CCL14A0A0B4J2E2 113 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 CCDC169A6NNP5 214 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 ANKRD63C9JTQ0 380 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 TMX2-CTNND1H3BSU7 103 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 DLGAP1O14490 977 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 ICOSLGO75144 302 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 EEDO75530 441 aaKnown RBP2.08□□□□□ -2.08
RFC4-211ENST00000460408 CIB2O75838 187 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 CLPXO76031 633 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 HRH1P35367 487 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 NBL1P41271 181 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 CDKN1BP46527 198 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 SSR4P51571 173 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 SLC7A9P82251 487 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 PON3Q15166 354 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 CCL15Q16663 113 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 VPS26BQ4G0F5 336 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 XKR7Q5GH72 579 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 DUX4L9Q6RFH8 374 aaPredicted RBP2.08□□□□□ -2.08
RFC4-211ENST00000460408 TIFABQ6ZNK6 161 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 MMAAQ8IVH4 418 aaKnown RBP2.08□□□□□ -2.08
RFC4-211ENST00000460408 GTPBP8Q8N3Z3 284 aaPredicted RBP2.08□□□□□ -2.08
RFC4-211ENST00000460408 Q8N976 141 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 OR7G2Q8NG99 324 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 OR10R2Q8NGX6 335 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 RHEBL1Q8TAI7 183 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 ELMO1Q92556 727 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 DUS3LQ96G46 650 aaKnown RBP2.08□□□□□ -2.08
RFC4-211ENST00000460408 CEP170P1Q96L14 293 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 ATP5SQ99766 215 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 LINC00597Q9H2U6 94 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 RPF2Q9H7B2 306 aaKnown RBP2.08□□□□□ -2.08
RFC4-211ENST00000460408 FGF20Q9NP95 211 aaPredicted RBP2.08□□□□□ -2.08
RFC4-211ENST00000460408 LHX9Q9NQ69 397 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 SHPKQ9UHJ6 478 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 KLK12Q9UKR0 248 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 TBX21Q9UL17 535 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 ITPR3Q14573 2671 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 RTL1A6NKG5 1358 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 FLT4P35916 1363 aa2.08□□□□□ -2.08
RFC4-211ENST00000460408 XIRP2A4UGR9 3374 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 C2CD3Q4AC94 2353 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 WDR87Q6ZQQ6 2873 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 IGLV4-69A0A075B6H9 119 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 IGLV3-16A0A075B6K0 115 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 OR2AG2A6NM03 316 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 HIDE1A8MVS5 230 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 H0YHG0 523 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 DYNC1I1O14576 645 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 PLEKP08567 350 aaPredicted RBP2.07□□□□□ -2.08
RFC4-211ENST00000460408 PABPC4LP0CB38 370 aaKnown RBP2.07□□□□□ -2.08
RFC4-211ENST00000460408 TNNI1P19237 187 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 MAGP20916 626 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 GDI1P31150 447 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 ACLYP53396 1101 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 CDH6P55285 790 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 BEX3Q00994 111 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 SRSF5Q13243 272 aaKnown RBP2.07□□□□□ -2.08
RFC4-211ENST00000460408 EBI3Q14213 229 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 GGTLC2Q14390 218 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 PPP1R7Q15435 360 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 LRRC26Q2I0M4 334 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 LY6G6FQ5SQ64 297 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 ARMC12Q5T9G4 340 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 PRAMEF20Q5VT98 475 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 ANKRD26P1Q6NSI1 321 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 ZFP2Q6ZN57 461 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 TMEM179Q6ZVK1 233 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 STRADAQ7RTN6 431 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 LINC01551Q86U37 167 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 PCP2Q8IVA1 136 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 MREGQ8N565 214 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 C15orf56Q8N910 161 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 LKAAEAR1Q8TD35 194 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 ACMSDQ8TDX5 336 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 ZFP90Q8TF47 636 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 KIFAP3Q92845 792 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 PIK3IP1Q96FE7 263 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 P2RX4Q99571 388 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 CHAC1Q9BUX1 264 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 OR51M1Q9H341 326 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 CD84Q9UIB8 345 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 ZNF223Q9UK11 482 aaPredicted RBP2.07□□□□□ -2.08
RFC4-211ENST00000460408 KIAA1257Q9ULG3 409 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 ING4Q9UNL4 249 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 ASTN1O14525 1302 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 GAKO14976 1311 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 CENPJQ9HC77 1338 aaPredicted RBP2.07□□□□□ -2.08
RFC4-211ENST00000460408 DNAH14Q0VDD8 3507 aa2.07□□□□□ -2.08
RFC4-211ENST00000460408 HECTD1Q9ULT8 2610 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms