RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 PPA2Q9H2U2 334 aa7.91□□□□□ -1.14
HDAC3-202ENST00000459727 TTYH1Q9H313 450 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-202ENST00000459727 POFUT1Q9H488 388 aa7.91□□□□□ -1.14
HDAC3-202ENST00000459727 PTGES2Q9H7Z7 377 aa7.91□□□□□ -1.14
HDAC3-202ENST00000459727 IFT46Q9NQC8 304 aa7.91□□□□□ -1.14
HDAC3-202ENST00000459727 G6PC2Q9NQR9 355 aa7.91□□□□□ -1.14
HDAC3-202ENST00000459727 CA10Q9NS85 328 aa7.91□□□□□ -1.14
HDAC3-202ENST00000459727 KLRF1Q9NZS2 232 aa7.91□□□□□ -1.14
HDAC3-202ENST00000459727 WNT16Q9UBV4 365 aa7.91□□□□□ -1.14
HDAC3-202ENST00000459727 SUSD2Q9UGT4 822 aa7.91□□□□□ -1.14
HDAC3-202ENST00000459727 RARRES3Q9UL19 164 aa7.91□□□□□ -1.14
HDAC3-202ENST00000459727 POLR1DQ9Y2S0 133 aa7.91□□□□□ -1.14
HDAC3-202ENST00000459727 ARHGEF17Q96PE2 2063 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-202ENST00000459727 FXYD6-FXYD2A0A087WZ82 144 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 A0A1B0GTH9 108 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 KANTRA0A1W2PQU2 76 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 CPED1A4D0V7 1026 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 MS4A18H0YCH9 400 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 ARPC5O15511 151 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 SDC3O75056 442 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 KDM4BO94953 1096 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 IFNA6P05013 189 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 SLC25A4P12235 298 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 CXCL2P19875 107 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 CD34P28906 385 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 GNALP38405 381 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 ECI1P42126 302 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 GUCA1AP43080 201 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-202ENST00000459727 MAGEB1P43366 347 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 EFNB2P52799 333 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 EMP2P54851 167 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 HLXQ14774 488 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-202ENST00000459727 PPA1Q15181 289 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 POU4F3Q15319 338 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 KCNMB1Q16558 191 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 ODF4Q2M2E3 257 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 MS4A18Q3C1V0 323 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 C1orf189Q5VU69 101 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 C1QL3Q5VWW1 255 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 OR5M10Q6IEU7 315 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 ZNF529Q6P280 563 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 TMEM81Q6P7N7 255 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 COX15Q7KZN9 410 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 Q7L0L9 218 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 HSD17B13Q7Z5P4 300 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-202ENST00000459727 LYG2Q86SG7 212 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 GPAT4Q86UL3 456 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 BEST3Q8N1M1 668 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 BPIFB2Q8N4F0 458 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 APCDD1LQ8NCL9 501 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 OR1M1Q8NGA1 313 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 OR6X1Q8NH79 312 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 KCNG3Q8TAE7 436 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 C10orf35Q96D05 121 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 SLAMF6Q96DU3 332 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 MS4A3Q96HJ5 214 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 PHB2Q99623 299 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 URM1Q9BTM9 101 aaKnown RBP7.9□□□□□ -1.14
HDAC3-202ENST00000459727 OR11A1Q9GZK7 315 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 MFFQ9GZY8 342 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 FXYD6Q9H0Q3 95 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 SLC26A1Q9H2B4 701 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 METTL7AQ9H8H3 244 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 FAM206AQ9NX38 181 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 ZNF224Q9NZL3 707 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 CTSFQ9UBX1 484 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 GDF2Q9UK05 429 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-202ENST00000459727 WIF1Q9Y5W5 379 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 SLCO1B1Q9Y6L6 691 aa7.9□□□□□ -1.14
HDAC3-202ENST00000459727 CHD9Q3L8U1 2897 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 TRBV11-1A0A0K0K1C0 115 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 A0A1B0GTI1 187 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 ZSCAN5BA6NJL1 495 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 H0YC42 278 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 ADAM10O14672 748 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 GMFGO60234 142 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 IL2RAP01589 272 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 FBXO45P0C2W1 286 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 ACSM4P0C7M7 580 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 NUP62P37198 522 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-202ENST00000459727 RPS27P42677 84 aaKnown RBP7.89□□□□□ -1.15
HDAC3-202ENST00000459727 BIDP55957 195 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 SLC35A1P78382 337 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 TAGLNQ01995 201 aaKnown RBP7.89□□□□□ -1.15
HDAC3-202ENST00000459727 FOXF1Q12946 379 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 TAF13Q15543 124 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 PLPPR5Q32ZL2 321 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 FAM209AQ5JX71 171 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 FAAP20Q6NZ36 180 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF813Q6ZN06 617 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 LANCL3Q6ZV70 420 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 DOK3Q7L591 496 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 OVCH2Q7RTZ1 564 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 CPEB2Q7Z5Q1 589 aaKnown RBP7.89□□□□□ -1.15
HDAC3-202ENST00000459727 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-202ENST00000459727 SLC25A42Q86VD7 318 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 TMEM17Q86X19 198 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 LYPD6Q86Y78 171 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 ARRDC1Q8N5I2 433 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 DEFB123Q8N688 67 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms