RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 FBXO45P0C2W1 286 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 ADCYAP1P18509 176 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 TACR3P29371 465 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 BDKRB2P30411 391 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 RPS27P42677 84 aaKnown RBP7.63□□□□□ -1.19
VPS50-208ENST00000458707 KIR2DL1P43626 348 aaPredicted RBP7.63□□□□□ -1.19
VPS50-208ENST00000458707 ATP1B3P54709 279 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 HNRNPKP61978 463 aaKnown RBP eCLIP7.63□□□□□ -1.19
VPS50-208ENST00000458707 PMPCAQ10713 525 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 ELOCQ15369 112 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 CD226Q15762 336 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 MEP1BQ16820 701 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 MAJINQ3KP22 176 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 C1orf100Q5SVJ3 147 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 PAPD4Q6PIY7 484 aaKnown RBP7.63□□□□□ -1.19
VPS50-208ENST00000458707 RD3Q7Z3Z2 195 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 CATSPERDQ86XM0 798 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 LYPD6Q86Y78 171 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 LDLRAD3Q86YD5 345 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 PUSL1Q8N0Z8 303 aaKnown RBP7.63□□□□□ -1.19
VPS50-208ENST00000458707 ZNF615Q8N8J6 731 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 PLPP7Q8NBV4 271 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 DMBX1Q8NFW5 382 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 FAM174AQ8TBP5 190 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 MITD1Q8WV92 249 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 TSACCQ96A04 125 aaPredicted RBP7.63□□□□□ -1.19
VPS50-208ENST00000458707 TSNAXQ99598 290 aaKnown RBP7.63□□□□□ -1.19
VPS50-208ENST00000458707 PRRT1Q99946 306 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 ADAM19Q9H013 955 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 OR10A5Q9H207 317 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 UNKLQ9H9P5 680 aaKnown RBP7.63□□□□□ -1.19
VPS50-208ENST00000458707 STARD5Q9NSY2 213 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 KLK13Q9UKR3 277 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 DHDHQ9UQ10 334 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 NOP16Q9Y3C1 178 aaKnown RBP7.63□□□□□ -1.19
VPS50-208ENST00000458707 OR10H1Q9Y4A9 318 aa7.63□□□□□ -1.19
VPS50-208ENST00000458707 MRPS18BQ9Y676 258 aaKnown RBP7.63□□□□□ -1.19
VPS50-208ENST00000458707 TRBV6-7A0A0A0MS04 114 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 MEGF11A6BM72 1044 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 H3BSH0 61 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 GPR31O00270 319 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 GPANK1O95872 356 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 CRYABP02511 175 aaKnown RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 CLPSP04118 112 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 CD2P06729 351 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 CD79AP11912 226 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 RNH1P13489 461 aaKnown RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 EDN3P14138 238 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 RAB6AP20340 208 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 PPICP45877 212 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 NAAAQ02083 359 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 TAF13Q15543 124 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 SSX2Q16385 188 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 NNATQ16517 81 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 PNLIPRP3Q17RR3 467 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 GLYATL3Q5SZD4 288 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 RAB11FIP2Q7L804 512 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 ZNF627Q7L945 461 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 DMRTC2Q8IXT2 367 aaPredicted RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 OR5AP2Q8NGF4 316 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 AQP3Q92482 292 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 TAAR8Q969N4 342 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 MRGPRFQ96AM1 343 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 ZNF524Q96C55 264 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 C8orf44Q96CB5 159 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 KTI12Q96EK9 354 aaPredicted RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 NARS2Q96I59 477 aaKnown RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 DGAT2Q96PD7 388 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 LMF1Q96S06 567 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 TCEAL7Q9BRU2 100 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 PDCD10Q9BUL8 212 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 UBQLN4Q9NRR5 601 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 C19orf12Q9NSK7 152 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 CKLFQ9UBR5 152 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 B9D1Q9UPM9 204 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 SLC22A13Q9Y226 551 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 MRPS33Q9Y291 106 aaKnown RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 RHBDD3Q9Y3P4 386 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 C9orf170A2RU37 121 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 H0Y8X5 98 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 K7EQS6 105 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 EIF1AYO14602 144 aaKnown RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 ZNF264O43296 627 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 SRSF10O75494 262 aaKnown RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 PLGP00747 810 aaPredicted RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 BGLAPP02818 100 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 GALNSP34059 522 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 TNFRSF4P43489 277 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 EIF1AXP47813 144 aaKnown RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 ARRB1P49407 418 aaPredicted RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 PRKXP51817 358 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 RPP30P78346 268 aaKnown RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 MFGE8Q08431 387 aaPredicted RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 PPP1R1AQ13522 171 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 SLC18B1Q6NT16 456 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 KCTD18Q6PI47 426 aaPredicted RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 CBLN3Q6UW01 205 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 PGAP1Q75T13 922 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 INO80EQ8NBZ0 244 aaPredicted RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 SLC30A7Q8NEW0 376 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms