RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 GABARAPL1Q9H0R8 117 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 NKIRAS2Q9NYR9 191 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 MED13LQ71F56 2210 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 C17orf100A8MU93 164 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 ZNF593O00488 134 aaPredicted RBP13.83□□□□□ -0.2
CD28-203ENST00000458610 SURF4O15260 269 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 PRODHO43272 600 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 GLCEO94923 617 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 GYPBP06028 91 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 SPARCP09486 303 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 GSTT1P30711 240 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 SLC15A1P46059 708 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 TPTEP56180 551 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 MRPS11P82912 194 aaKnown RBP13.83□□□□□ -0.2
CD28-203ENST00000458610 KPNB1Q14974 876 aaKnown RBP13.83□□□□□ -0.2
CD28-203ENST00000458610 MAD2L1BPQ15013 274 aaPredicted RBP13.83□□□□□ -0.2
CD28-203ENST00000458610 TAF13Q15543 124 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 SNAPC1Q16533 368 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 SPATA46Q5T0L3 261 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 CLEC9AQ6UXN8 241 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 RFPL4BQ6ZWI9 263 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 SHFQ7M4L6 423 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 ZCCHC24Q8N2G6 241 aaKnown RBP13.83□□□□□ -0.2
CD28-203ENST00000458610 CIARTQ8N365 385 aaPredicted RBP13.83□□□□□ -0.2
CD28-203ENST00000458610 ZNF786Q8N393 782 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 DIRC2Q96SL1 478 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 OR51V1Q9H2C8 321 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 TPK1Q9H3S4 243 aa13.83□□□□□ -0.2
CD28-203ENST00000458610 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.83□□□□□ -0.2
CD28-203ENST00000458610 MYEF2Q9P2K5 600 aaKnown RBP13.83□□□□□ -0.2
CD28-203ENST00000458610 HIVEP1P15822 2718 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 IGHV4-30-2A0A087WSY4 118 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 FAM183AA6NL82 134 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 F5H5K5 113 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 NAT2P11245 290 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 ZNF81P51508 661 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 PTGES3Q15185 160 aaKnown RBP13.82□□□□□ -0.2
CD28-203ENST00000458610 PCK2Q16822 640 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 SLC35D3Q5M8T2 416 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 KDM4DQ6B0I6 523 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 PLBD1Q6P4A8 553 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 CFAP77Q6ZQR2 320 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 ZNF511Q8NB15 262 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 PYDC1Q8WXC3 89 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 RDH5Q92781 318 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 HAVCR1Q96D42 359 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 INTS14Q96SY0 518 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 SEMA6AQ9H2E6 1030 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 DECR2Q9NUI1 292 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 TVP23BQ9NYZ1 205 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 H2AFY2Q9P0M6 372 aaPredicted RBP13.82□□□□□ -0.2
CD28-203ENST00000458610 ZDHHC8Q9ULC8 765 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 STARD10Q9Y365 291 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 COMMD3-BMI1R4GMX3 469 aa13.82□□□□□ -0.2
CD28-203ENST00000458610 ARFGEF3Q5TH69 2177 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 TPD52L2O43399 206 aaKnown RBP13.81□□□□□ -0.2
CD28-203ENST00000458610 TIMM8AO60220 97 aaPredicted RBP13.81□□□□□ -0.2
CD28-203ENST00000458610 LY6HO94772 140 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 APOC1P02654 83 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 CLUP10909 449 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 RAC2P15153 192 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 USF1P22415 310 aaPredicted RBP13.81□□□□□ -0.2
CD28-203ENST00000458610 MPV17P39210 176 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 RPS7P62081 194 aaKnown RBP13.81□□□□□ -0.2
CD28-203ENST00000458610 LOXL1Q08397 574 aaPredicted RBP13.81□□□□□ -0.2
CD28-203ENST00000458610 MALLQ13021 153 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 ALKBH6Q3KRA9 238 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 KLHL12Q53G59 568 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 LINC01590Q5TEZ4 76 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 RHOUQ7L0Q8 258 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 CXXC5Q7LFL8 322 aaKnown RBP13.81□□□□□ -0.2
CD28-203ENST00000458610 DCXRQ7Z4W1 244 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 CPOQ8IVL8 374 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 ZNRF4Q8WWF5 429 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 SLC7A6Q92536 515 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 CMBLQ96DG6 245 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 MAP6Q96JE9 813 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 RBM4BQ9BQ04 359 aaKnown RBP13.81□□□□□ -0.2
CD28-203ENST00000458610 HCAR1Q9BXC0 346 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 EGLN1Q9GZT9 426 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 SP140LQ9H930 580 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 WDR76Q9H967 626 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 ORC6Q9Y5N6 252 aa13.81□□□□□ -0.2
CD28-203ENST00000458610 LCATP04180 440 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 HEXAP06865 529 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 DBHP09172 617 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 ACSM4P0C7M7 580 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 SELEP16581 610 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 KITLGP21583 273 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 IGFBP5P24593 272 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 GIFP27352 417 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 TMEM33P57088 247 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 PSG7Q13046 419 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 KRTAP27-1Q3LI81 207 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 LCN1P1Q5VSP4 162 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 TMEM236Q5W0B7 351 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 COLCA1Q6ZS62 124 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 ERI1Q8IV48 349 aaKnown RBP13.8□□□□□ -0.2
CD28-203ENST00000458610 ZNF454Q8N9F8 522 aa13.8□□□□□ -0.2
CD28-203ENST00000458610 OR6N2Q8NGY6 317 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms