RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ASH2LQ9UBL3 628 aa18.06■□□□□ 0.48
CPNE1-220ENST00000458038 LRRC30A6NM36 301 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 SLC16A7O60669 478 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 RPS2P15880 293 aaKnown RBP18.05■□□□□ 0.48
CPNE1-220ENST00000458038 FUT4P22083 530 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 GPR4P46093 362 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 PAX2Q02962 417 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 KRR1Q13601 381 aaKnown RBP18.05■□□□□ 0.48
CPNE1-220ENST00000458038 C1orf94Q6P1W5 598 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 TBPL2Q6SJ96 375 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 FKBP9P1Q75LS8 142 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 CBLL1Q75N03 491 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 PARP8Q8N3A8 854 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 GJC3Q8NFK1 279 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 RAB40AQ8WXH6 277 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 UPRTQ96BW1 309 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 MEGF10Q96KG7 1140 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 ZNF48Q96MX3 618 aaPredicted RBP18.05■□□□□ 0.48
CPNE1-220ENST00000458038 TMEM165Q9HC07 324 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 VSX1Q9NZR4 365 aaPredicted RBP18.05■□□□□ 0.48
CPNE1-220ENST00000458038 CAPN7Q9Y6W3 813 aa18.05■□□□□ 0.48
CPNE1-220ENST00000458038 GSTA4O15217 222 aa18.04■□□□□ 0.48
CPNE1-220ENST00000458038 ZNF682O95780 498 aa18.04■□□□□ 0.48
CPNE1-220ENST00000458038 ZNF26P17031 533 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-220ENST00000458038 BPIFB3P59826 476 aa18.04■□□□□ 0.48
CPNE1-220ENST00000458038 GNB2P62879 340 aa18.04■□□□□ 0.48
CPNE1-220ENST00000458038 SLC9A3R2Q15599 337 aa18.04■□□□□ 0.48
CPNE1-220ENST00000458038 CCDC92Q53HC0 331 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-220ENST00000458038 LEG1Q6P5S2 330 aa18.04■□□□□ 0.48
CPNE1-220ENST00000458038 NLRC3Q7RTR2 1065 aa18.04■□□□□ 0.48
CPNE1-220ENST00000458038 SLC7A6Q92536 515 aa18.04■□□□□ 0.48
CPNE1-220ENST00000458038 NEIL1Q96FI4 390 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-220ENST00000458038 GPX7Q96SL4 187 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-220ENST00000458038 HDHD2Q9H0R4 259 aa18.04■□□□□ 0.48
CPNE1-220ENST00000458038 SYT4Q9H2B2 425 aa18.04■□□□□ 0.48
CPNE1-220ENST00000458038 NRIP3Q9NQ35 241 aa18.04■□□□□ 0.48
CPNE1-220ENST00000458038 CMTM6Q9NX76 183 aa18.04■□□□□ 0.48
CPNE1-220ENST00000458038 COA3Q9Y2R0 106 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-220ENST00000458038 TGP01266 2768 aa18.04■□□□□ 0.48
CPNE1-220ENST00000458038 IGHV2-70DA0A0C4DH43 119 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 CXCR6O00574 342 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 PTP4A3O75365 173 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 PLATP00750 562 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 SELEP16581 610 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 CRABP1P29762 137 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 HLXQ14774 488 aaPredicted RBP18.03■□□□□ 0.48
CPNE1-220ENST00000458038 KLBQ86Z14 1044 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 SLC15A3Q8IY34 581 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 OR5AS1Q8N127 324 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 COQ7Q99807 217 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 SLC30A2Q9BRI3 323 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 C1QTNF5Q9BXJ0 243 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 SIGLEC7Q9Y286 467 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 POLR1DQ9Y2S0 133 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 ENPP4Q9Y6X5 453 aa18.03■□□□□ 0.48
CPNE1-220ENST00000458038 A0A1W2PRQ8 180 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 IQCF6A8MYZ5 107 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 NDUFAB1O14561 156 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 KCNAB3O43448 404 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 RPS6KA3P51812 740 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 HIST1H3AP68431 136 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 LIPEQ05469 1076 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 HNRNPA0Q13151 305 aaKnown RBP18.02■□□□□ 0.48
CPNE1-220ENST00000458038 DGCR6Q14129 220 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 HIST2H3PS2Q5TEC6 136 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 OR2T2Q6IF00 324 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 DNM1P34Q6PK57 102 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 TREML4Q6UXN2 200 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 DPY19L2P2Q6ZN68 376 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 HIST2H3AQ71DI3 136 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 OR8B3Q8NGG8 313 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 RP9Q8TA86 221 aaKnown RBP18.02■□□□□ 0.48
CPNE1-220ENST00000458038 SLC7A13Q8TCU3 470 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 ERGIC1Q969X5 290 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 RCN3Q96D15 328 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 OR8B2Q96RD0 313 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 HOPXQ9BPY8 73 aaPredicted RBP18.02■□□□□ 0.48
CPNE1-220ENST00000458038 HCAR1Q9BXC0 346 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 RERGLQ9H628 205 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 KRCC1Q9NPI7 259 aaPredicted RBP18.02■□□□□ 0.48
CPNE1-220ENST00000458038 TMEM100Q9NV29 134 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 ARGLU1Q9NWB6 273 aaPredicted RBP18.02■□□□□ 0.48
CPNE1-220ENST00000458038 PTTG3PQ9NZH4 202 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 MMP24Q9Y5R2 645 aa18.02■□□□□ 0.48
CPNE1-220ENST00000458038 KIR2DS1A0A191URI9 304 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 A0A1B0GUS0 222 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 A0A1B0GWJ7 208 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 RER1O15258 196 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 TXNDC12O95881 172 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 DBHP09172 617 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 IGHV4-38-2P0DP08 117 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 ERFP50548 548 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 ZNF404Q494X3 552 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 C16orf87Q6PH81 154 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 CELF2-AS1Q8N7Q2 184 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 OR10AD1Q8NGE0 317 aa18.01■□□□□ 0.47
CPNE1-220ENST00000458038 ZNF420Q8TAQ5 688 aaPredicted RBP18.01■□□□□ 0.47
CPNE1-220ENST00000458038 DACT3Q96B18 629 aaPredicted RBP18.01■□□□□ 0.47
CPNE1-220ENST00000458038 FAM46AQ96IP4 442 aaKnown RBP18.01■□□□□ 0.47
CPNE1-220ENST00000458038 HSH2DQ96JZ2 352 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms