RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 SWI5Q1ZZU3 235 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 AGAP6Q5VW22 663 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 TMEM154Q6P9G4 183 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 RFPL4BQ6ZWI9 263 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 SLC16A9Q7RTY1 509 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 FBXL14Q8N1E6 418 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 ZNF454Q8N9F8 522 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 RHOXF1Q8NHV9 184 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 PIGTQ969N2 578 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 MRPL24Q96A35 216 aaKnown RBP12.16□□□□□ -0.46
SMPD4-215ENST00000457039 SLAMF6Q96DU3 332 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 ABHD6Q9BV23 337 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 YIPF3Q9GZM5 350 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 ADGRL4Q9HBW9 690 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 CBLN4Q9NTU7 201 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 TBCCD1Q9NVR7 557 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 DNAJC27Q9NZQ0 273 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 WARS2Q9UGM6 360 aaKnown RBP12.16□□□□□ -0.46
SMPD4-215ENST00000457039 KLHDC2Q9Y2U9 406 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 DSCAMO60469 2012 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 TEX15Q9BXT5 2789 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 TMEM129A0AVI4 362 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 ENTPD6O75354 484 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 ATP6V1G2O95670 118 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 ABHD16AO95870 558 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 MRPL3P09001 348 aaKnown RBP12.15□□□□□ -0.46
SMPD4-215ENST00000457039 ACSM4P0C7M7 580 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 PAX1P15863 534 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 ALOX5APP20292 161 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 DNASE1P24855 282 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 TMED1Q13445 227 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 EIF2B1Q14232 305 aaKnown RBP12.15□□□□□ -0.46
SMPD4-215ENST00000457039 MEDAGQ5VYS4 303 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 COLCA1Q6ZS62 124 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 RHOUQ7L0Q8 258 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 ZNF555Q8NEP9 628 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 ABHD4Q8TB40 342 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 RNF133Q8WVZ7 376 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 IPCEF1Q8WWN9 437 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-215ENST00000457039 CNN2Q99439 309 aaKnown RBP12.15□□□□□ -0.46
SMPD4-215ENST00000457039 ADI1Q9BV57 179 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 OR51B6Q9H340 312 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 PLK3Q9H4B4 646 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 EIF3KQ9UBQ5 218 aaKnown RBP12.15□□□□□ -0.46
SMPD4-215ENST00000457039 AASSQ9UDR5 926 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 RRP15Q9Y3B9 282 aaKnown RBP12.15□□□□□ -0.46
SMPD4-215ENST00000457039 CMAHPQ9Y471 501 aa12.15□□□□□ -0.46
SMPD4-215ENST00000457039 IGLV3-9A0A075B6K5 115 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 B9A039 149 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 ZNF878C9JN71 531 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 J3QW42 95 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 MPZL2O60487 215 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 CLIC3O95833 236 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 LYNP07948 512 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 SBK2P0C263 348 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 ZNF250P15622 560 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 OPRL1P41146 370 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 RGS6P49758 472 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 HCCSP53701 268 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 DEFB113Q30KQ7 82 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 ZNF691Q5VV52 312 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 TTC23Q5W5X9 447 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 RGS7BPQ6MZT1 257 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-215ENST00000457039 ARL9Q6T311 187 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 UNQ6126/PRO20091Q6UXV3 157 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 LRP11Q86VZ4 500 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 C1orf174Q8IYL3 243 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 DHRSXQ8N5I4 330 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 OR1J1Q8NGS3 322 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 APH1BQ8WW43 257 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 RFKQ969G6 155 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 MARS2Q96GW9 593 aaKnown RBP12.14□□□□□ -0.47
SMPD4-215ENST00000457039 DOK1Q99704 481 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 C1QTNF5Q9BXJ0 243 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 MRPL37Q9BZE1 423 aaKnown RBP12.14□□□□□ -0.47
SMPD4-215ENST00000457039 VCXQ9H320 206 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 POFUT1Q9H488 388 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 ELOVL3Q9HB03 270 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 ZNF701Q9NV72 531 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-215ENST00000457039 BEX4Q9NWD9 120 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-215ENST00000457039 COPS3Q9UNS2 423 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 GRIP1Q9Y3R0 1128 aa12.14□□□□□ -0.47
SMPD4-215ENST00000457039 VSTM5A8MXK1 200 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 PRR32B1ATL7 298 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 F5H5K5 113 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 H0YAE9 185 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 H0YJX3 145 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 M0R135 149 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 LCKP06239 509 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 CAPGP40121 348 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 EVX1P49640 407 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 NUDT6P53370 316 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 PPP1CBP62140 327 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 MAD2L1BPQ15013 274 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-215ENST00000457039 TMEM255AQ5JRV8 349 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 SPATC1Q76KD6 591 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 NAA40Q86UY6 237 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 OR51G2Q8NGK0 314 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 SLC25A40Q8TBP6 338 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 CYGBQ8WWM9 190 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms