RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 TMCC2O75069 709 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 NGFP01138 241 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 OR4A8P0C604 315 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 FAM157BP0CG42 384 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 PAX1P15863 534 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 CCNOP22674 350 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 PEX2P28328 305 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 SERPINF1P36955 418 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 RAD52P43351 418 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 HTR5AP47898 357 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 GALK2Q01415 458 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 SNTB2Q13425 540 aaKnown RBP8.65□□□□□ -1.02
ATG4A-206ENST00000457035 APOFQ13790 326 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 RAB35Q15286 201 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 OGFRL1Q5TC84 451 aaPredicted RBP8.65□□□□□ -1.02
ATG4A-206ENST00000457035 AGAP6Q5VW22 663 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 NXNL2Q5VZ03 156 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 TMEM154Q6P9G4 183 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 VHLLQ6RSH7 139 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 MEPCEQ7L2J0 689 aaKnown RBP8.65□□□□□ -1.02
ATG4A-206ENST00000457035 DPY19L4Q7Z388 723 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 DCXRQ7Z4W1 244 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 ZNF101Q8IZC7 436 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 FBXL14Q8N1E6 418 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 GALNT4Q8N4A0 578 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 OR8J1Q8NGP2 316 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 ST7LQ8TDW4 575 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 TRUB1Q8WWH5 349 aaKnown RBP8.65□□□□□ -1.02
ATG4A-206ENST00000457035 C4orf45Q96LM5 186 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 INTS14Q96SY0 518 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 PITX2Q99697 317 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 CCL19Q99731 98 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 COQ7Q99807 217 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 BCL2L14Q9BZR8 327 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 HDHD2Q9H0R4 259 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 CBLN4Q9NTU7 201 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 ZNF701Q9NV72 531 aaPredicted RBP8.65□□□□□ -1.02
ATG4A-206ENST00000457035 FAIMQ9NVQ4 179 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 FAM118AQ9NWS6 357 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 ATPIF1Q9UII2 106 aa8.65□□□□□ -1.02
ATG4A-206ENST00000457035 YLPM1P49750 1951 aaKnown RBP8.64□□□□□ -1.03
ATG4A-206ENST00000457035 LOC100130705A0A1B0GUX0 176 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 VSTM5A8MXK1 200 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 B9A039 149 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 SELENOFO60613 162 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 DBHP09172 617 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 SPARCP09486 303 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 ZNF250P15622 560 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 GABRB1P18505 474 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 EVX1P49640 407 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 CDC42P60953 191 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 ERVS71-1P61550 626 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 SNRPGP62308 76 aaKnown RBP8.64□□□□□ -1.03
ATG4A-206ENST00000457035 RELBQ01201 579 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 SLC34A1Q06495 639 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 ECH1Q13011 328 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 EFNB3Q15768 340 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 DEFB113Q30KQ7 82 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 SLC25A30Q5SVS4 291 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 SHFQ7M4L6 423 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 LRP11Q86VZ4 500 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 ERI1Q8IV48 349 aaKnown RBP8.64□□□□□ -1.03
ATG4A-206ENST00000457035 PACRGLQ8N7B6 248 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 OR6N2Q8NGY6 317 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 MRPL24Q96A35 216 aaKnown RBP8.64□□□□□ -1.03
ATG4A-206ENST00000457035 RDH12Q96NR8 316 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 DCLRE1CQ96SD1 692 aaKnown RBP8.64□□□□□ -1.03
ATG4A-206ENST00000457035 DOK1Q99704 481 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 MRPL37Q9BZE1 423 aaKnown RBP8.64□□□□□ -1.03
ATG4A-206ENST00000457035 PLK3Q9H4B4 646 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 RNPEPL1Q9HAU8 725 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 C8orf4Q9NR00 106 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 DDX28Q9NUL7 540 aaKnown RBP8.64□□□□□ -1.03
ATG4A-206ENST00000457035 TBCCD1Q9NVR7 557 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 BEX4Q9NWD9 120 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-206ENST00000457035 SMPD3Q9NY59 655 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-206ENST00000457035 HAO2Q9NYQ3 351 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 H2AFY2Q9P0M6 372 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-206ENST00000457035 EIF3KQ9UBQ5 218 aaKnown RBP8.64□□□□□ -1.03
ATG4A-206ENST00000457035 GRIP1Q9Y3R0 1128 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 CMAHPQ9Y471 501 aa8.64□□□□□ -1.03
ATG4A-206ENST00000457035 SMPD2O60906 423 aa8.63□□□□□ -1.03
ATG4A-206ENST00000457035 ALOX5APP20292 161 aa8.63□□□□□ -1.03
ATG4A-206ENST00000457035 OTX1P32242 354 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-206ENST00000457035 HCCSP53701 268 aa8.63□□□□□ -1.03
ATG4A-206ENST00000457035 RPS7P62081 194 aaKnown RBP8.63□□□□□ -1.03
ATG4A-206ENST00000457035 RPS23P62266 143 aaKnown RBP8.63□□□□□ -1.03
ATG4A-206ENST00000457035 GGTLC2Q14390 218 aa8.63□□□□□ -1.03
ATG4A-206ENST00000457035 RGS7BPQ6MZT1 257 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-206ENST00000457035 COLCA1Q6ZS62 124 aa8.63□□□□□ -1.03
ATG4A-206ENST00000457035 RHOUQ7L0Q8 258 aa8.63□□□□□ -1.03
ATG4A-206ENST00000457035 ZNF771Q7L3S4 317 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-206ENST00000457035 SLC16A9Q7RTY1 509 aa8.63□□□□□ -1.03
ATG4A-206ENST00000457035 NAA40Q86UY6 237 aa8.63□□□□□ -1.03
ATG4A-206ENST00000457035 C1orf174Q8IYL3 243 aa8.63□□□□□ -1.03
ATG4A-206ENST00000457035 OR1J1Q8NGS3 322 aa8.63□□□□□ -1.03
ATG4A-206ENST00000457035 RHOXF1Q8NHV9 184 aa8.63□□□□□ -1.03
ATG4A-206ENST00000457035 OTOSQ8NHW6 89 aa8.63□□□□□ -1.03
ATG4A-206ENST00000457035 FAM81AQ8TBF8 368 aa8.63□□□□□ -1.03
ATG4A-206ENST00000457035 RNF133Q8WVZ7 376 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms