RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 DBHP09172 617 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 ZNF823P16415 610 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 PAICSP22234 425 aaKnown RBP12.12□□□□□ -0.47
HDAC4-205ENST00000454542 IGFBP5P24593 272 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 EPHA2P29317 976 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 MPV17P39210 176 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 ALDH3B1P43353 468 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 RGS6P49758 472 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 ECH1Q13011 328 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 PTGES3Q15185 160 aaKnown RBP12.12□□□□□ -0.47
HDAC4-205ENST00000454542 SPATA46Q5T0L3 261 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 TMEM236Q5W0B7 351 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 C12orf73Q69YU5 71 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 ARL9Q6T311 187 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 CLEC2AQ6UVW9 174 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 TIGD4Q8IY51 512 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 ZNF511Q8NB15 262 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 KLF14Q8TD94 323 aaPredicted RBP12.12□□□□□ -0.47
HDAC4-205ENST00000454542 ST7LQ8TDW4 575 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 C10orf105Q8TEF2 133 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 SEMA6AQ9H2E6 1030 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 SLCO1C1Q9NYB5 712 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 USE1Q9NZ43 259 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 ENOPH1Q9UHY7 261 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 A0A1W2PPW3 197 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 SAC3D1A6NKF1 404 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 VWC2LB2RUY7 222 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 PRR23D1E9PI22 279 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-205ENST00000454542 E9PQ18 207 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 ADH4P08319 380 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 INHBBP09529 407 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 ACSM4P0C7M7 580 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 PRR23D2P0DMB1 279 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-205ENST00000454542 RPS27P42677 84 aaKnown RBP12.11□□□□□ -0.47
HDAC4-205ENST00000454542 MMP15P51511 669 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 EFNB1P98172 346 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 ZNF718Q3SXZ3 478 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 SLC35D3Q5M8T2 416 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 PLBD1Q6P4A8 553 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 ZCCHC24Q8N2G6 241 aaKnown RBP12.11□□□□□ -0.47
HDAC4-205ENST00000454542 BBS1Q8NFJ9 593 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 OR6K6Q8NGW6 343 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 COG8Q96MW5 612 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 VRK1Q99986 396 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-205ENST00000454542 RBM4BQ9BQ04 359 aaKnown RBP12.11□□□□□ -0.47
HDAC4-205ENST00000454542 C1QTNF5Q9BXJ0 243 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 MS4A5Q9H3V2 200 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 S100A14Q9HCY8 104 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 TAAR3PQ9P1P4 343 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 CGGBP1Q9UFW8 167 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-205ENST00000454542 DUSP13Q9UII6 198 aa12.11□□□□□ -0.47
HDAC4-205ENST00000454542 CCDC182A6NF36 153 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 C17orf100A8MU93 164 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 NDUFS8O00217 210 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 NCR1O76036 304 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 ALPLP05186 524 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 SLC25A16P16260 332 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 KITLGP21583 273 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 GSTT1P30711 240 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 SELENOVP59797 346 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 KRTAP1-1Q07627 177 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 CXXC5Q7LFL8 322 aaKnown RBP12.1□□□□□ -0.47
HDAC4-205ENST00000454542 DCXRQ7Z4W1 244 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 BIVMQ86UB2 503 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 CPOQ8IVL8 374 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 C10orf67Q8IYJ2 551 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 ICA1LQ8NDH6 482 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 OR2AJ1Q8NGZ0 328 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 APOBEC3DQ96AK3 386 aaPredicted RBP12.1□□□□□ -0.47
HDAC4-205ENST00000454542 INTS14Q96SY0 518 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 PITX2Q99697 317 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 CDADC1Q9BWV3 514 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 TEX12Q9BXU0 123 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 PRRG3Q9BZD7 231 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 TPK1Q9H3S4 243 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 NKIRAS2Q9NYR9 191 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 TANC2Q9HCD6 1990 aa12.1□□□□□ -0.47
HDAC4-205ENST00000454542 ANK3Q12955 4377 aaKnown RBP12.09□□□□□ -0.47
HDAC4-205ENST00000454542 ZSCAN5BA6NJL1 495 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 ZNF878C9JN71 531 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 M0R135 149 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 ZNF593O00488 134 aaPredicted RBP12.09□□□□□ -0.47
HDAC4-205ENST00000454542 PRKYO43930 277 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 ERCC1P07992 297 aaPredicted RBP12.09□□□□□ -0.47
HDAC4-205ENST00000454542 SPARCP09486 303 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 NAT2P11245 290 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 GIFP27352 417 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 GCH1P30793 250 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 PDLIM4P50479 330 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 MRPS11P82912 194 aaKnown RBP12.09□□□□□ -0.47
HDAC4-205ENST00000454542 PSG7Q13046 419 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 GGTLC2Q14390 218 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 SNAPC1Q16533 368 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 MOGQ16653 247 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 NKPD1Q17RQ9 610 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 FBXW12Q6X9E4 464 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 PQLC1Q8N2U9 271 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 OR6N2Q8NGY6 317 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 RNF133Q8WVZ7 376 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 FAM168AQ92567 244 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms