RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 DHRS12A0PJE2 317 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 ARRDC5A6NEK1 342 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 WNT9BO14905 357 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 SOX14O95416 240 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 MT-ND5P03915 603 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 GSTM3P21266 225 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 KITLGP21583 273 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 LIPAP38571 399 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 SLC36A3Q495N2 470 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 CFAP77Q6ZQR2 320 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-207ENST00000453796 SLC37A3Q8NCC5 494 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 OR10G2Q8NGC3 310 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 CLDND2Q8NHS1 167 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 RBM4Q9BWF3 364 aaKnown RBP12.38□□□□□ -0.43
HSPG2-207ENST00000453796 TSSK6Q9BXA6 273 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 NMNAT2Q9BZQ4 307 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 PNRC2Q9NPJ4 139 aaKnown RBP12.38□□□□□ -0.43
HSPG2-207ENST00000453796 CYSLTR2Q9NS75 346 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 TBC1D23Q9NUY8 699 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 ARMC1Q9NVT9 282 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 PURGQ9UJV8 347 aaKnown RBP12.38□□□□□ -0.43
HSPG2-207ENST00000453796 BAIAP2Q9UQB8 552 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 POMPQ9Y244 141 aa12.38□□□□□ -0.43
HSPG2-207ENST00000453796 IGHV1-69-2A0A0G2JMI3 117 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 TCRBV3S1A0A5B6 114 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 PLSCR5A0PG75 271 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 SPRY3O43610 288 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 DNAJC8O75937 253 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-207ENST00000453796 CD55P08174 381 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 PSKH1P11801 424 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 PYCR1P32322 319 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 RGS6P49758 472 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 ERFP50548 548 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 CDH15P55291 814 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 BNIP1Q12981 228 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 CDK5R2Q13319 367 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 TSTQ16762 297 aaKnown RBP12.37□□□□□ -0.43
HSPG2-207ENST00000453796 CHRFAM7AQ494W8 412 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 SPRNQ5BIV9 151 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 LYPD4Q6UWN0 246 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 Q6ZR03 302 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 COLCA1Q6ZS62 124 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 USP51Q70EK9 711 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 LINC00346Q8IVM7 164 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 PAPD5Q8NDF8 572 aaKnown RBP12.37□□□□□ -0.43
HSPG2-207ENST00000453796 GIPC3Q8TF64 312 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 HAVCR1Q96D42 359 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 COG8Q96MW5 612 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 FEVQ99581 238 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 SAP30LQ9HAJ7 183 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 MSL2Q9HCI7 577 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 DECR2Q9NUI1 292 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 CDC42EP3Q9UKI2 254 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 ZDHHC8Q9ULC8 765 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 KCNS2Q9ULS6 477 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 CACNG2Q9Y698 323 aa12.37□□□□□ -0.43
HSPG2-207ENST00000453796 GSC2O15499 205 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 PPIHO43447 177 aaKnown RBP12.36□□□□□ -0.43
HSPG2-207ENST00000453796 TIMM8AO60220 97 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-207ENST00000453796 CDC14BO60729 498 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 TGFAP01135 160 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 HOXB6P17509 224 aaKnown RBP12.36□□□□□ -0.43
HSPG2-207ENST00000453796 LMO4P61968 165 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 CCNIQ14094 377 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 CRMP1Q14194 572 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 FLOT2Q14254 428 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 FBXW12Q6X9E4 464 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 OR2T33Q8NG76 320 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 OR10S1Q8NGN2 331 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 OR2T4Q8NH00 348 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 PTP4A1Q93096 173 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 SLCO4A1Q96BD0 722 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 CMBLQ96DG6 245 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 MAP6Q96JE9 813 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 DIRC2Q96SL1 478 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 C1QTNF5Q9BXJ0 243 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 CADM1Q9BY67 442 aaKnown RBP12.36□□□□□ -0.43
HSPG2-207ENST00000453796 KCNG2Q9UJ96 466 aa12.36□□□□□ -0.43
HSPG2-207ENST00000453796 HLA-DQA2P01906 255 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 ACSM4P0C7M7 580 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 FAM157CP0CG43 387 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 RAC2P15153 192 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 RPS27P42677 84 aaKnown RBP12.35□□□□□ -0.43
HSPG2-207ENST00000453796 SLC25A1P53007 311 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 PCK2Q16822 640 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 ZMAT1Q5H9K5 638 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 SPATA24Q86W54 205 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 LINC01356Q8N9X3 169 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 PROKR2Q8NFJ6 384 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 OR9Q1Q8NGQ5 310 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 APOBEC3DQ96AK3 386 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-207ENST00000453796 ELMOD3Q96FG2 381 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 ATF6BQ99941 703 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 CMC2Q9NRP2 79 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 LPAR3Q9UBY5 353 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 COMMD3-BMI1R4GMX3 469 aa12.35□□□□□ -0.43
HSPG2-207ENST00000453796 TVP23AA6NH52 213 aa12.34□□□□□ -0.43
HSPG2-207ENST00000453796 FAM157AC9JC47 383 aa12.34□□□□□ -0.43
HSPG2-207ENST00000453796 TPD52L2O43399 206 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms