RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 APH1BQ8WW43 257 aa12.64□□□□□ -0.39
VPS16-205ENST00000453689 CDADC1Q9BWV3 514 aa12.64□□□□□ -0.39
VPS16-205ENST00000453689 ANKRD60Q9BZ19 345 aa12.64□□□□□ -0.39
VPS16-205ENST00000453689 WDR76Q9H967 626 aa12.64□□□□□ -0.39
VPS16-205ENST00000453689 DLL4Q9NR61 685 aa12.64□□□□□ -0.39
VPS16-205ENST00000453689 HAO2Q9NYQ3 351 aa12.64□□□□□ -0.39
VPS16-205ENST00000453689 ASH2LQ9UBL3 628 aa12.64□□□□□ -0.39
VPS16-205ENST00000453689 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.64□□□□□ -0.39
VPS16-205ENST00000453689 MAP1AP78559 2803 aaPredicted RBP12.63□□□□□ -0.39
VPS16-205ENST00000453689 H7C417 338 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 PTHP01270 115 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 SPARCP09486 303 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 OR4A8P0C604 315 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 CCL2P13500 99 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 APEX1P27695 318 aaKnown RBP12.63□□□□□ -0.39
VPS16-205ENST00000453689 PLP2Q04941 152 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 POU4F2Q12837 409 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 EFNB3Q15768 340 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 PCK2Q16822 640 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 PABPC1L2AQ5JQF8 200 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 TEX30Q5JUR7 227 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 THAP5Q7Z6K1 395 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 PAQR4Q8N4S7 273 aaPredicted RBP12.63□□□□□ -0.39
VPS16-205ENST00000453689 OR6N2Q8NGY6 317 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 CNN2Q99439 309 aaKnown RBP12.63□□□□□ -0.39
VPS16-205ENST00000453689 C1orf198Q9H425 327 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 AASSQ9UDR5 926 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 CYB5R1Q9UHQ9 305 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 SPEF1Q9Y4P9 236 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 TIMM10BQ9Y5J6 103 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 LHFPL6Q9Y693 200 aa12.63□□□□□ -0.39
VPS16-205ENST00000453689 IQCMA0A1B0GVH7 501 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 B9A039 149 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 ZNF593O00488 134 aaPredicted RBP12.62□□□□□ -0.39
VPS16-205ENST00000453689 GPRIN2O60269 458 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 SELENOFO60613 162 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 WBP4O75554 376 aaKnown RBP12.62□□□□□ -0.39
VPS16-205ENST00000453689 MYF6P23409 242 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 NAA10P41227 235 aaPredicted RBP12.62□□□□□ -0.39
VPS16-205ENST00000453689 SNRPD2P62316 118 aaKnown RBP12.62□□□□□ -0.39
VPS16-205ENST00000453689 PSG4Q00888 419 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 GALK2Q01415 458 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 ZNF91Q05481 1191 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 MSMPQ1L6U9 139 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 TBC1D28Q2M2D7 210 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 SLC18B1Q6NT16 456 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 SHFQ7M4L6 423 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 LINC00346Q8IVM7 164 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 CPEB3Q8NE35 698 aaKnown RBP12.62□□□□□ -0.39
VPS16-205ENST00000453689 GJC3Q8NFK1 279 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 OR2AJ1Q8NGZ0 328 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 AKR7LQ8NHP1 331 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 CNIH3Q8TBE1 160 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 FBLIM1Q8WUP2 373 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 OR2H1Q9GZK4 316 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 WNT5BQ9H1J7 359 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 Q9H521 79 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 CDH20Q9HBT6 801 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 PMF1-BGLAPU3KQ54 211 aa12.62□□□□□ -0.39
VPS16-205ENST00000453689 FLNAP21333 2647 aaKnown RBP12.62□□□□□ -0.39
VPS16-205ENST00000453689 TMEM129A0AVI4 362 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 TRIM64A6NGJ6 449 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 TRIM64BA6NI03 449 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 VSTM5A8MXK1 200 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 MRPL3P09001 348 aaKnown RBP12.61□□□□□ -0.39
VPS16-205ENST00000453689 PSKH1P11801 424 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 BMP4P12644 408 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 APLNRP35414 380 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 GLRXP35754 106 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 RPS27P42677 84 aaKnown RBP12.61□□□□□ -0.39
VPS16-205ENST00000453689 MTNR1AP48039 350 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 NUDT6P53370 316 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 HIST1H3AP68431 136 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 CDK5R2Q13319 367 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 RAB35Q15286 201 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 CLEC12BQ2HXU8 276 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 HIST2H3PS2Q5TEC6 136 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 CORO6Q6QEF8 472 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 HIST2H3AQ71DI3 136 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 SLC16A9Q7RTY1 509 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 DPY19L4Q7Z388 723 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 ALDH16A1Q8IZ83 802 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 CIARTQ8N365 385 aaPredicted RBP12.61□□□□□ -0.39
VPS16-205ENST00000453689 OR51G2Q8NGK0 314 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 OR1J2Q8NGS2 313 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 YIPF3Q9GZM5 350 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 PLK3Q9H4B4 646 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 BARX1Q9HBU1 254 aaPredicted RBP12.61□□□□□ -0.39
VPS16-205ENST00000453689 ADGRL4Q9HBW9 690 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 PLEK2Q9NYT0 353 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 RPL36Q9Y3U8 105 aaKnown RBP12.61□□□□□ -0.39
VPS16-205ENST00000453689 CMAHPQ9Y471 501 aa12.61□□□□□ -0.39
VPS16-205ENST00000453689 LOC100509620A0A075B734 347 aa12.6□□□□□ -0.39
VPS16-205ENST00000453689 H7C1Q1 480 aa12.6□□□□□ -0.39
VPS16-205ENST00000453689 RER1O15258 196 aa12.6□□□□□ -0.39
VPS16-205ENST00000453689 SGCEO43556 437 aa12.6□□□□□ -0.39
VPS16-205ENST00000453689 SSX4O60224 188 aa12.6□□□□□ -0.39
VPS16-205ENST00000453689 DOK2O60496 412 aa12.6□□□□□ -0.39
VPS16-205ENST00000453689 SBK2P0C263 348 aa12.6□□□□□ -0.39
VPS16-205ENST00000453689 FAM157BP0CG42 384 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms