RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ABHD12BQ7Z5M8 362 aaPredicted RBP10.44□□□□□ -0.74
VTA1-203ENST00000452973 NOXA1Q86UR1 476 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 OR8S1Q8NH09 359 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 FAM46BQ96A09 425 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 FAM71F1Q96KD3 344 aaPredicted RBP10.44□□□□□ -0.74
VTA1-203ENST00000452973 PIGQQ9BRB3 760 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 B3GNT4Q9C0J1 378 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 MOV10Q9HCE1 1003 aaKnown RBP10.44□□□□□ -0.74
VTA1-203ENST00000452973 FANCFQ9NPI8 374 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 DIABLOQ9NR28 239 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 GLTPQ9NZD2 209 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 NUBP2Q9Y5Y2 271 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 ASPMQ8IZT6 3477 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 TMEM272A0A1B0GTI8 110 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 CTDSPLO15194 276 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 ZNF883P0CG24 379 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 CYB561P49447 251 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 MMP16P51512 607 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 IFITM2Q01629 132 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 RSPO4Q2I0M5 234 aaPredicted RBP10.44□□□□□ -0.74
VTA1-203ENST00000452973 SLC25A47Q6Q0C1 308 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 OR13C9Q8NGT0 318 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 GIMAP1Q8WWP7 306 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 THRSPQ92748 146 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 SGCZQ96LD1 299 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 ZNF416Q9BWM5 594 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 SRXN1Q9BYN0 137 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 SLC5A6Q9Y289 635 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 CNOT1A5YKK6 2376 aaKnown RBP10.44□□□□□ -0.74
VTA1-203ENST00000452973 NCOA6Q14686 2063 aaPredicted RBP10.44□□□□□ -0.74
VTA1-203ENST00000452973 LOC100289279A0A1B0GTE1 492 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 GGT3PA6NGU5 568 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 ZNF878C9JN71 531 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 F5H5K5 113 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 ACOT7O00154 380 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 GLSO94925 669 aaPredicted RBP10.43□□□□□ -0.74
VTA1-203ENST00000452973 IGHEP01854 428 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 TRAPPC2P0DI81 140 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 TRAPPC2BP0DI82 140 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 ACHEP22303 614 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 PCGF3Q3KNV8 242 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 DEGS2Q6QHC5 323 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 CREB3L2Q70SY1 520 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 NAA40Q86UY6 237 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 SLC7A5P1Q8MH63 180 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 ZNF283Q8N7M2 679 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 ADPRHL1Q8NDY3 354 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 ROBO4Q8WZ75 1007 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 ADAT3Q96EY9 351 aaPredicted RBP10.43□□□□□ -0.74
VTA1-203ENST00000452973 SH2D2AQ9NP31 389 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 DEPPQ9NTK1 212 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 XRCC3O43542 346 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 PMS2P2O95744 297 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 UBCP0CG48 685 aaKnown RBP10.43□□□□□ -0.74
VTA1-203ENST00000452973 ABOP16442 354 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 GDF1P27539 372 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 SLC6A9P48067 706 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 ZNF121P58317 390 aaPredicted RBP10.43□□□□□ -0.74
VTA1-203ENST00000452973 H3F3AP84243 136 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 FAM57BQ71RH2 274 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 DVL3Q92997 716 aaPredicted RBP10.43□□□□□ -0.74
VTA1-203ENST00000452973 ZNF837Q96EG3 531 aaPredicted RBP10.43□□□□□ -0.74
VTA1-203ENST00000452973 MS4A3Q96HJ5 214 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 SFXN2Q96NB2 322 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 EDEM2Q9BV94 578 aa10.43□□□□□ -0.74
VTA1-203ENST00000452973 A6NL46 340 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 SSNA1O43805 119 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 RBBP9O75884 186 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 HPP00738 406 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 ALDOBP05062 364 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 FKBP2P26885 142 aaKnown RBP10.42□□□□□ -0.74
VTA1-203ENST00000452973 VEGFCP49767 419 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 AP3S2P59780 193 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 RAC1P63000 192 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 CSNK2A1P68400 391 aaPredicted RBP10.42□□□□□ -0.74
VTA1-203ENST00000452973 SPEM2Q0P670 501 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 DYRK1AQ13627 763 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 ANKRD16Q6P6B7 361 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 PLXDC2Q6UX71 529 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 LINC00696Q6ZRV3 163 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 HDDC2Q7Z4H3 204 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 OR9K2Q8NGE7 335 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 OR52N4Q8NGI2 321 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 OR4D6Q8NGJ1 314 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 OR2B2Q9GZK3 357 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 C20orf85Q9H1P6 137 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 LRFN1Q9P244 771 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 ZNF319Q9P2F9 582 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 ELF5Q9UKW6 265 aaPredicted RBP10.42□□□□□ -0.74
VTA1-203ENST00000452973 A0A1B0GVI7 797 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 PINLYPA6NC86 204 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 ARPC1BO15143 372 aaKnown RBP10.42□□□□□ -0.74
VTA1-203ENST00000452973 CXCL13O43927 109 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 EIF1BO60739 113 aaKnown RBP10.42□□□□□ -0.74
VTA1-203ENST00000452973 MT-CO3P00414 261 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 CSRP1P21291 193 aaKnown RBP10.42□□□□□ -0.74
VTA1-203ENST00000452973 ITGA3P26006 1051 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 CARD18P57730 90 aa10.42□□□□□ -0.74
VTA1-203ENST00000452973 SNRPD2P62316 118 aaKnown RBP10.42□□□□□ -0.74
VTA1-203ENST00000452973 BTG1P62324 171 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms