RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 USP9YO00507 2555 aaPredicted RBP10.04□□□□□ -0.8
SCN9A-204ENST00000452182 UTP20O75691 2785 aaKnown RBP10.04□□□□□ -0.8
SCN9A-204ENST00000452182 LOC100509620A0A075B734 347 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.04□□□□□ -0.8
SCN9A-204ENST00000452182 A0A1W2PQL4 384 aaPredicted RBP10.04□□□□□ -0.8
SCN9A-204ENST00000452182 FAM221AA4D161 298 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 SIAH2O43255 324 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 FAM20BO75063 409 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 ZNF254O75437 659 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 APOL3O95236 402 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 CRYAAP02489 173 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 ZNF35P13682 527 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 COX6B1P14854 86 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 CRHBPP24387 322 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 APEX1P27695 318 aaKnown RBP10.04□□□□□ -0.8
SCN9A-204ENST00000452182 APLNRP35414 380 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 OPRL1P41146 370 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 HTR5AP47898 357 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 GDI2P50395 445 aaKnown RBP10.04□□□□□ -0.8
SCN9A-204ENST00000452182 GRB2P62993 217 aaKnown RBP10.04□□□□□ -0.8
SCN9A-204ENST00000452182 NAAAQ02083 359 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 BSPH1Q075Z2 132 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 TBC1D28Q2M2D7 210 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 ALKBH2Q6NS38 261 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 TMEM154Q6P9G4 183 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 ZNF322Q6U7Q0 402 aaPredicted RBP10.04□□□□□ -0.8
SCN9A-204ENST00000452182 ZNF679Q8IYX0 411 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 ZNF540Q8NDQ6 660 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 OR10H4Q8NGA5 316 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 PLPPR2Q96GM1 343 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 DCLRE1CQ96SD1 692 aaKnown RBP10.04□□□□□ -0.8
SCN9A-204ENST00000452182 TMEM204Q9BSN7 226 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 MROQ9BYG7 248 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 YTHDF1Q9BYJ9 559 aaKnown RBP10.04□□□□□ -0.8
SCN9A-204ENST00000452182 DUSP21Q9H596 190 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 NIPAL2Q9H841 368 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 BLOC1S6Q9UL45 172 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 DIMT1Q9UNQ2 313 aaKnown RBP10.04□□□□□ -0.8
SCN9A-204ENST00000452182 MYRFQ9Y2G1 1151 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 TPRKBQ9Y3C4 175 aa10.04□□□□□ -0.8
SCN9A-204ENST00000452182 ICE1Q9Y2F5 2266 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 IGHV2OR16-5A0A0B4J2B6 119 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 A6NNC1 897 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 SULT1C4O75897 302 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 LOXP28300 417 aaPredicted RBP10.03□□□□□ -0.8
SCN9A-204ENST00000452182 PCSK6P29122 969 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 DCTDP32321 178 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 SLC35A2P78381 396 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 ZNF85Q03923 595 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 ST3GAL4Q11206 333 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 RSPO1Q2MKA7 263 aaPredicted RBP10.03□□□□□ -0.8
SCN9A-204ENST00000452182 ZNF684Q5T5D7 378 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 KCTD20Q7Z5Y7 419 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 ZNF786Q8N393 782 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 SPTSSAQ969W0 71 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 TMEM80Q96HE8 168 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 OR8B4Q96RC9 309 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 KCNJ15Q99712 375 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 ZNF649Q9BS31 505 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 RHNO1Q9BSD3 238 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 CENPMQ9NSP4 180 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 LRCH1Q9Y2L9 728 aa10.03□□□□□ -0.8
SCN9A-204ENST00000452182 SPTAN1Q13813 2472 aaKnown RBP10.02□□□□□ -0.81
SCN9A-204ENST00000452182 DAPL1A0PJW8 107 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 C5orf49A4QMS7 147 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 PRR32B1ATL7 298 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 J3QW42 95 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 ABCD4O14678 606 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 APOC1P02654 83 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 CD3EP07766 207 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 CALCRP30988 508 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 GALEQ14376 348 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 CDONQ4KMG0 1287 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 RNLSQ5VYX0 342 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 PLEKHG7Q6ZR37 379 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 AHSA2Q719I0 299 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 SSX6Q7RTT6 188 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 KRT77Q7Z794 578 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 C1orf174Q8IYL3 243 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 RFLNBQ8N5W9 214 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 MYDGFQ969H8 173 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 MRPL48Q96GC5 212 aaKnown RBP10.02□□□□□ -0.81
SCN9A-204ENST00000452182 TBX5Q99593 518 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 KCNS3Q9BQ31 491 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 COPS4Q9BT78 406 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 CDH20Q9HBT6 801 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 ERVK13-1Q9NX77 482 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 HEATR1Q9H583 2144 aaKnown RBP10.02□□□□□ -0.81
SCN9A-204ENST00000452182 DOPEY2Q9Y3R5 2298 aa10.02□□□□□ -0.81
SCN9A-204ENST00000452182 CDK1P06493 297 aa10.01□□□□□ -0.81
SCN9A-204ENST00000452182 H2BFMP0C1H6 154 aa10.01□□□□□ -0.81
SCN9A-204ENST00000452182 LIMS3P0CW19 117 aa10.01□□□□□ -0.81
SCN9A-204ENST00000452182 LIMS4P0CW20 117 aa10.01□□□□□ -0.81
SCN9A-204ENST00000452182 CCL2P13500 99 aa10.01□□□□□ -0.81
SCN9A-204ENST00000452182 RGS6P49758 472 aa10.01□□□□□ -0.81
SCN9A-204ENST00000452182 TPTEP56180 551 aa10.01□□□□□ -0.81
SCN9A-204ENST00000452182 GABARAPL2P60520 117 aa10.01□□□□□ -0.81
SCN9A-204ENST00000452182 ACTA2P62736 377 aa10.01□□□□□ -0.81
SCN9A-204ENST00000452182 ACTG2P63267 376 aa10.01□□□□□ -0.81
SCN9A-204ENST00000452182 TAF13Q15543 124 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms