RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	FAHD2B	Q6P2I3	314 aa	Predicted RBP	7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	CORO6	Q6QEF8	472 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	DPY19L2P2	Q6ZN68	376 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	C8orf86	Q6ZUL3	223 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	ZER1	Q7Z7L7	766 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	SYT9	Q86SS6	491 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	ADCK1	Q86TW2	530 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	LINC00346	Q8IVM7	164 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	ZDHHC21	Q8IVQ6	265 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	SDR9C7	Q8NEX9	313 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	OR2Z1	Q8NG97	314 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	OR4K13	Q8NH42	304 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	OR1F12	Q8NHA8	337 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	RAB1C	Q92928	201 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	CMBL	Q96DG6	245 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	ELMOD3	Q96FG2	381 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	FAHD2A	Q96GK7	314 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	C1orf159	Q96HA4	380 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	DHRS1	Q96LJ7	313 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	SAMD8	Q96LT4	415 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	DCLRE1C	Q96SD1	692 aa	Known RBP	7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	GPX7	Q96SL4	187 aa	Predicted RBP	7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	NMNAT3	Q96T66	252 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	GAL3ST1	Q99999	423 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	C19orf24	Q9BVV8	132 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	RACGAP1	Q9H0H5	632 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	ZNF665	Q9H7R5	613 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	GORASP2	Q9H8Y8	452 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	SRA1	Q9HD15	236 aa	Known RBP	7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	RPRD1B	Q9NQG5	326 aa	Known RBP	7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	DCAF16	Q9NXF7	216 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	NKIRAS2	Q9NYR9	191 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	VSX1	Q9NZR4	365 aa	Predicted RBP	7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	PURG	Q9UJV8	347 aa	Known RBP	7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	STARD10	Q9Y365	291 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	IGHV3-64D	A0A0J9YX35	117 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	ADARB2-AS1	A8MUL3	147 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	AHCYL1	O43865	530 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	HLA-DQA2	P01906	255 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	COX5B	P10606	129 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	HIST1H1C	P16403	213 aa	Known RBP	7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	PCMT1	P22061	227 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	PPP1R8	Q12972	351 aa	Known RBP	7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	RFX4	Q33E94	735 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	CCDC92	Q53HC0	331 aa	Predicted RBP	7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	ZMAT1	Q5H9K5	638 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	FAM209A	Q5JX71	171 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	SLC35F1	Q5T1Q4	408 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	SAMD5	Q5TGI4	173 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	DNM1P34	Q6PK57	102 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	PIGW	Q7Z7B1	504 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	NPEPL1	Q8NDH3	523 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	OR9Q2	Q8NGE9	314 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	RAB39B	Q96DA2	213 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	FUZ	Q9BT04	418 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	EGLN3	Q9H6Z9	239 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	WDR76	Q9H967	626 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	CYSLTR2	Q9NS75	346 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	TBCCD1	Q9NVR7	557 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	CD300A	Q9UGN4	299 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	ZDHHC8	Q9ULC8	765 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	LHFPL6	Q9Y693	200 aa		7.35	□□□□□ -1.23
RFX3-209	ENST00000451859	ANK2	Q01484	3957 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	LOC105371242	A0A075B767	164 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	IGLV1-36	A0A0B4J1U3	117 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	OR6C6	A6NF89	314 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859		B2RBV5	119 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859		H3BSA7	217 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	TCF21	O43680	179 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	PLPP2	O43688	288 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	ICMT	O60725	284 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	UBOX5	O94941	541 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	TXNDC12	O95881	172 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	PNP	P00491	289 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	IGHV2-5	P01817	119 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	SBK2	P0C263	348 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	ADRA2C	P18825	462 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	TNFSF4	P23510	183 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	FPR3	P25089	353 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	CRABP1	P29762	137 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	PYCR1	P32322	319 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	IFNGR2	P38484	337 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	LIPA	P38571	399 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	RPS27	P42677	84 aa	Known RBP	7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	LSM6	P62312	80 aa	Known RBP	7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	LCN2	P80188	198 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	LCE1D	Q5T752	114 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	LIPN	Q5VXI9	398 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	OR2T2	Q6IF00	324 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	ACSM5	Q6NUN0	579 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	PGBD2	Q6P3X8	592 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	ZNF620	Q6ZNG0	422 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	CFAP77	Q6ZQR2	320 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	PEG10	Q86TG7	708 aa	Known RBP	7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	C1orf174	Q8IYL3	243 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	OR6V1	Q8N148	313 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	ATG16L2	Q8NAA4	619 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	CYB561A3	Q8NBI2	242 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	BHLHE23	Q8NDY6	225 aa		7.34	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms