RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CTAG2O75638 210 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 SERPINA5P05154 406 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 SPARCP09486 303 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 CCL2P13500 99 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 PRF1P14222 555 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 PTAFRP25105 342 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 APEX1P27695 318 aaKnown RBP11.3□□□□□ -0.6
VPS33A-202ENST00000451053 CALCRP30988 508 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 NAAAQ02083 359 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 TLE4Q04727 773 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 EMX1Q04741 257 aaPredicted RBP11.3□□□□□ -0.6
VPS33A-202ENST00000451053 PLP2Q04941 152 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 SCRN3Q0VDG4 424 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 BLMHQ13867 455 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 PCK2Q16822 640 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 CCDC92Q53HC0 331 aaPredicted RBP11.3□□□□□ -0.6
VPS33A-202ENST00000451053 ADAM5Q6NVV9 412 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 CFAP77Q6ZQR2 320 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 KCTD8Q6ZWB6 473 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 VASH1Q7L8A9 365 aaPredicted RBP11.3□□□□□ -0.6
VPS33A-202ENST00000451053 ZNF367Q7RTV3 350 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 CDC20BQ86Y33 519 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 OR2AJ1Q8NGZ0 328 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 OR52N1Q8NH53 320 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 OTOSQ8NHW6 89 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 SMAP2Q8WU79 429 aaPredicted RBP11.3□□□□□ -0.6
VPS33A-202ENST00000451053 ASB17Q8WXJ9 295 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 RORBQ92753 470 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 C14orf79Q96F83 325 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 ALG8Q9BVK2 526 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 ACOT13Q9NPJ3 140 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 GDF2Q9UK05 429 aaPredicted RBP11.3□□□□□ -0.6
VPS33A-202ENST00000451053 FBXL3Q9UKT7 428 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 CAB39Q9Y376 341 aaPredicted RBP11.3□□□□□ -0.6
VPS33A-202ENST00000451053 ANKHD1Q8IWZ3 2542 aaKnown RBP11.3□□□□□ -0.6
VPS33A-202ENST00000451053 ADGRG4Q8IZF6 3080 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 LOC100509620A0A075B734 347 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 IGHV2OR16-5A0A0B4J2B6 119 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 IQCMA0A1B0GVH7 501 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 SHISA9B4DS77 424 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 ATP6V1G2-DDX39BF2Z307 99 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 GOSR1O95249 250 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 CD3EP07766 207 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 LIMS3P0CW19 117 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 LIMS4P0CW20 117 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 JUNBP17275 347 aaPredicted RBP11.29□□□□□ -0.6
VPS33A-202ENST00000451053 RPL5P46777 297 aaKnown RBP11.29□□□□□ -0.6
VPS33A-202ENST00000451053 ETV1P50549 477 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 WNT4P56705 351 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 EGR3Q06889 387 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 GALEQ14376 348 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 RAB35Q15286 201 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 NEDD8Q15843 81 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 KCTD18Q6PI47 426 aaPredicted RBP11.29□□□□□ -0.6
VPS33A-202ENST00000451053 PLEKHG7Q6ZR37 379 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 DPY19L4Q7Z388 723 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 DCXRQ7Z4W1 244 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 PAQR4Q8N4S7 273 aaPredicted RBP11.29□□□□□ -0.6
VPS33A-202ENST00000451053 NANOGP1Q8N7R0 232 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 SLC30A7Q8NEW0 376 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 KBTBD8Q8NFY9 601 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 OR10S1Q8NGN2 331 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 HAVCR2Q8TDQ0 301 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 SNX33Q8WV41 574 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 NEUROG1Q92886 237 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 MAP6Q96JE9 813 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 TBX5Q99593 518 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 TMEM204Q9BSN7 226 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 PNRC2Q9NPJ4 139 aaKnown RBP11.29□□□□□ -0.6
VPS33A-202ENST00000451053 PLEK2Q9NYT0 353 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 RNF115Q9Y4L5 304 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 PKDREJQ9NTG1 2253 aa11.29□□□□□ -0.6
VPS33A-202ENST00000451053 A0A1W2PQL4 384 aaPredicted RBP11.28□□□□□ -0.6
VPS33A-202ENST00000451053 OR6C6A6NF89 314 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 SYNGR3O43761 229 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 CRYAAP02489 173 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 MT-ND5P03915 603 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 TACSTD2P09758 323 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 ZNF35P13682 527 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 ALOX5APP20292 161 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 PCMT1P22061 227 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 STOMP27105 288 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 SSTR2P30874 369 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 APLNRP35414 380 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 MAP2K4P45985 399 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 HTR5AP47898 357 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 HCCSP53701 268 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 ZNF85Q03923 595 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 MRPL28Q13084 256 aaKnown RBP11.28□□□□□ -0.6
VPS33A-202ENST00000451053 EIF2B1Q14232 305 aaKnown RBP11.28□□□□□ -0.6
VPS33A-202ENST00000451053 SPHARQ15513 63 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 MED22Q15528 200 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 ELFN2Q5R3F8 820 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 UBE2UQ5VVX9 321 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 SLC22A25Q6T423 547 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 ZNF704Q6ZNC4 412 aaPredicted RBP11.28□□□□□ -0.6
VPS33A-202ENST00000451053 FAM220AQ7Z4H9 259 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 KCTD20Q7Z5Y7 419 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 LHFPL3Q86UP9 236 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 TMEM200AQ86VY9 491 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms