RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 CIB4A0PJX0 185 aa16.81■□□□□ 0.28
RPS28-202ENST00000449223 DOK2O60496 412 aa16.81■□□□□ 0.28
RPS28-202ENST00000449223 RAD51DO75771 328 aa16.81■□□□□ 0.28
RPS28-202ENST00000449223 CCR9P51686 369 aa16.81■□□□□ 0.28
RPS28-202ENST00000449223 TSTQ16762 297 aaKnown RBP16.81■□□□□ 0.28
RPS28-202ENST00000449223 MTFR2Q6P444 385 aa16.81■□□□□ 0.28
RPS28-202ENST00000449223 ZNF75AQ96N20 296 aa16.81■□□□□ 0.28
RPS28-202ENST00000449223 KCNJ15Q99712 375 aa16.81■□□□□ 0.28
RPS28-202ENST00000449223 USB1Q9BQ65 265 aaKnown RBP16.81■□□□□ 0.28
RPS28-202ENST00000449223 SLC17A5Q9NRA2 495 aa16.81■□□□□ 0.28
RPS28-202ENST00000449223 SIRT4Q9Y6E7 314 aaPredicted RBP16.81■□□□□ 0.28
RPS28-202ENST00000449223 R4GMQ9 66 aa16.81■□□□□ 0.28
RPS28-202ENST00000449223 OR5H1A6NKK0 313 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 HLA-HP01893 362 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 PATE4P0C8F1 98 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 CELP19835 753 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 PAX7P23759 505 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 CHRNB4P30926 498 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 PSMA6P60900 246 aaKnown RBP16.8■□□□□ 0.28
RPS28-202ENST00000449223 ADORA2A-AS1P86434 159 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 RSPO1Q2MKA7 263 aaPredicted RBP16.8■□□□□ 0.28
RPS28-202ENST00000449223 ZNF829Q3KNS6 432 aaPredicted RBP16.8■□□□□ 0.28
RPS28-202ENST00000449223 SLC25A35Q3KQZ1 300 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 FBXL19-AS1Q494R0 122 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 SOWAHCQ53LP3 525 aaPredicted RBP16.8■□□□□ 0.28
RPS28-202ENST00000449223 LIPKQ5VXJ0 399 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 ZNF774Q6NX45 483 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 TMEM53Q6P2H8 277 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 SPATC1Q76KD6 591 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 BHLHA15Q7RTS1 189 aaPredicted RBP16.8■□□□□ 0.28
RPS28-202ENST00000449223 LUZP2Q86TE4 346 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 P2RY8Q86VZ1 359 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.8■□□□□ 0.28
RPS28-202ENST00000449223 ALDH16A1Q8IZ83 802 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 ZNF843Q8N446 348 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 OR2G2Q8NGZ5 317 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 OR1F12Q8NHA8 337 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 PGLYRP3Q96LB9 341 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 OR10A4Q9H209 315 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 FBXL3Q9UKT7 428 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 SF3B6Q9Y3B4 125 aaKnown RBP16.8■□□□□ 0.28
RPS28-202ENST00000449223 GRIP1Q9Y3R0 1128 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 ACOD1A6NK06 481 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 EEF1E1-BLOC1S5C9J1V9 151 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 EEF1E1O43324 174 aaKnown RBP16.8■□□□□ 0.28
RPS28-202ENST00000449223 C1QL1O75973 258 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 APOC1P02654 83 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 CD36P16671 472 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 GABRA5P31644 462 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 NANOS3P60323 173 aaKnown RBP16.8■□□□□ 0.28
RPS28-202ENST00000449223 RAB1AP62820 205 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 ALKBH1Q13686 389 aaKnown RBP16.8■□□□□ 0.28
RPS28-202ENST00000449223 GSG1Q2KHT4 349 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 C4orf17Q53FE4 359 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 PABPC1L2AQ5JQF8 200 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 ANKRD13BQ86YJ7 626 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 FAM169BQ8N8A8 192 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 WDR31Q8NA23 367 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 ASB5Q8WWX0 329 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 HSD17B8Q92506 261 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 CCDC120Q96HB5 630 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 C4orf45Q96LM5 186 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 FUNDC2Q9BWH2 189 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 MOB1AQ9H8S9 216 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 NOX3Q9HBY0 568 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 MOV10Q9HCE1 1003 aaKnown RBP16.8■□□□□ 0.28
RPS28-202ENST00000449223 FAM206AQ9NX38 181 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 FRRS1LQ9P0K9 344 aa16.8■□□□□ 0.28
RPS28-202ENST00000449223 GPRIN2O60269 458 aa16.79■□□□□ 0.28
RPS28-202ENST00000449223 RPP14O95059 124 aaKnown RBP16.79■□□□□ 0.28
RPS28-202ENST00000449223 PNPP00491 289 aa16.79■□□□□ 0.28
RPS28-202ENST00000449223 HSD11B1P28845 292 aa16.79■□□□□ 0.28
RPS28-202ENST00000449223 HOXC12P31275 282 aa16.79■□□□□ 0.28
RPS28-202ENST00000449223 PSMB10P40306 273 aa16.79■□□□□ 0.28
RPS28-202ENST00000449223 UBE2NP61088 152 aaKnown RBP16.79■□□□□ 0.28
RPS28-202ENST00000449223 TIMM23BQ5SRD1 257 aa16.79■□□□□ 0.28
RPS28-202ENST00000449223 CD200R1LQ6Q8B3 271 aa16.79■□□□□ 0.28
RPS28-202ENST00000449223 PRSS45Q7RTY3 260 aa16.79■□□□□ 0.28
RPS28-202ENST00000449223 FJX1Q86VR8 437 aa16.79■□□□□ 0.28
RPS28-202ENST00000449223 CATSPERDQ86XM0 798 aa16.79■□□□□ 0.28
RPS28-202ENST00000449223 CPEB3Q8NE35 698 aaKnown RBP16.79■□□□□ 0.28
RPS28-202ENST00000449223 IL17RDQ8NFM7 739 aa16.79■□□□□ 0.28
RPS28-202ENST00000449223 ZNF420Q8TAQ5 688 aaPredicted RBP16.79■□□□□ 0.28
RPS28-202ENST00000449223 RNF121Q9H920 327 aa16.79■□□□□ 0.28
RPS28-202ENST00000449223 COQ3Q9NZJ6 369 aa16.79■□□□□ 0.28
RPS28-202ENST00000449223 CEPT1Q9Y6K0 416 aa16.79■□□□□ 0.28
RPS28-202ENST00000449223 OR4C45A6NMZ5 311 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 ZNF701M0R085 212 aaPredicted RBP16.78■□□□□ 0.28
RPS28-202ENST00000449223 IGKV3-15P01624 115 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 CD79AP11912 226 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 GALP22466 123 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 GNLYP22749 145 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 PSMA1P25786 263 aaKnown RBP16.78■□□□□ 0.28
RPS28-202ENST00000449223 ASCL1P50553 236 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 TAF13Q15543 124 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 ZNF544Q6NX49 715 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 ZNF584Q8IVC4 421 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 PRSS35Q8N3Z0 413 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 ZFP41Q8N8Y5 198 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 STEAP2Q8NFT2 490 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms