RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 KIAA1324LA8MWY0 1029 aaPredicted RBP11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 DNAJC8O75937 253 aaPredicted RBP11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 ABHD16AO95870 558 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 CST1P01037 141 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 HOXB6P17509 224 aaKnown RBP11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 KITLGP21583 273 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 ZNF81P51508 661 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 ARHGDIAP52565 204 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 LMO4P61968 165 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 CDK5R2Q13319 367 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 PCK2Q16822 640 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 Q6ZR03 302 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 SLC37A3Q8NCC5 494 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 OR10G2Q8NGC3 310 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 OR10S1Q8NGN2 331 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 GIPC3Q8TF64 312 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 PTP4A1Q93096 173 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 CMBLQ96DG6 245 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 DCLRE1CQ96SD1 692 aaKnown RBP11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 COQ7Q99807 217 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 NTN4Q9HB63 628 aa11.96□□□□□ -0.49
RTFDC1-204ENST00000449062 LOC100289279A0A1B0GTE1 492 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 J3QW42 95 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 CD55P08174 381 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 PSKH1P11801 424 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 PYCR1P32322 319 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 LIPAP38571 399 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 CENPAP49450 140 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 ERFP50548 548 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 CHN2P52757 468 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 SLC25A1P53007 311 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 SLC36A3Q495N2 470 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 FAM209AQ5JX71 171 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 FBXW12Q6X9E4 464 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 CFAP77Q6ZQR2 320 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 LINC00346Q8IVM7 164 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 OR52L1Q8NGH7 329 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 SNX33Q8WV41 574 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 MAP6Q96JE9 813 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 HDHD2Q9H0R4 259 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 CYSLTR2Q9NS75 346 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 ARMC1Q9NVT9 282 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 PURGQ9UJV8 347 aaKnown RBP11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 BAIAP2Q9UQB8 552 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 CACNG2Q9Y698 323 aa11.95□□□□□ -0.5
RTFDC1-204ENST00000449062 SPRY3O43610 288 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 LMX1BO60663 402 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 CDC14BO60729 498 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 SOX14O95416 240 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 RAC2P15153 192 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 ZNF16P17020 682 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 PRKACGP22612 351 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 GPR6P46095 362 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 RGS6P49758 472 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 CRMP1Q14194 572 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 FLOT2Q14254 428 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 TSTQ16762 297 aaKnown RBP11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 LINC01590Q5TEZ4 76 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 LYPD4Q6UWN0 246 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 NAA40Q86UY6 237 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 HS3ST5Q8IZT8 346 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 OR2T33Q8NG76 320 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 OR2T4Q8NH00 348 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 CLDND2Q8NHS1 167 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 C1QTNF5Q9BXJ0 243 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 MSL2Q9HCI7 577 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 CMC2Q9NRP2 79 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 CGGBP1Q9UFW8 167 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 KCNG2Q9UJ96 466 aa11.94□□□□□ -0.5
RTFDC1-204ENST00000449062 WNK2Q9Y3S1 2297 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 CUBNO60494 3623 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 IGHV1-69-2A0A0G2JMI3 117 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 A0A1B0GWJ7 208 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 TVP23AA6NH52 213 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 FKBP6O75344 327 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 TGFAP01135 160 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 MT-ND5P03915 603 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 ACSM4P0C7M7 580 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 SPI1P17947 270 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 IGFBP5P24593 272 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 OTX1P32242 354 aaPredicted RBP11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 CDH15P55291 814 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 ECH1Q13011 328 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 HLXQ14774 488 aaPredicted RBP11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 TEX30Q5JUR7 227 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 ACSM5Q6NUN0 579 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 USP51Q70EK9 711 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 SPATA24Q86W54 205 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 ZNF511Q8NB15 262 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 OR51L1Q8NGJ5 315 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 OR9Q1Q8NGQ5 310 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 UTP4Q969X6 686 aaKnown RBP11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 APOBEC3DQ96AK3 386 aaPredicted RBP11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 COG8Q96MW5 612 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 DIRC2Q96SL1 478 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 HCAR1Q9BXC0 346 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 WDR76Q9H967 626 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 TBC1D23Q9NUY8 699 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 PDP1Q9P0J1 537 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms