RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 UPRTQ96BW1 309 aa11.15□□□□□ -0.62
HMGB3-204ENST00000448905 MEGF10Q96KG7 1140 aa11.15□□□□□ -0.62
HMGB3-204ENST00000448905 Q96M85 177 aa11.15□□□□□ -0.62
HMGB3-204ENST00000448905 OR8B2Q96RD0 313 aa11.15□□□□□ -0.62
HMGB3-204ENST00000448905 SIGLEC11Q96RL6 698 aa11.15□□□□□ -0.62
HMGB3-204ENST00000448905 ANKRD19PQ9H560 264 aa11.15□□□□□ -0.62
HMGB3-204ENST00000448905 BEX1Q9HBH7 125 aa11.15□□□□□ -0.62
HMGB3-204ENST00000448905 KRCC1Q9NPI7 259 aaPredicted RBP11.15□□□□□ -0.62
HMGB3-204ENST00000448905 ATPIF1Q9UII2 106 aa11.15□□□□□ -0.62
HMGB3-204ENST00000448905 POLR1DQ9Y2S0 133 aa11.15□□□□□ -0.62
HMGB3-204ENST00000448905 ADAM18Q9Y3Q7 739 aa11.15□□□□□ -0.62
HMGB3-204ENST00000448905 FAM32AQ9Y421 112 aaKnown RBP11.15□□□□□ -0.62
HMGB3-204ENST00000448905 A0A087WUU8 490 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 IGHV2-70DA0A0C4DH43 119 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 FXYD1O00168 92 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 NDUFB2O95178 105 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 SDHAP31040 664 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 CENPAP49450 140 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 MMP16P51512 607 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 DEFA6Q01524 100 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 ZNF181Q2M3W8 571 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 IFI44LQ53G44 452 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 OR2T2Q6IF00 324 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 DNM1P34Q6PK57 102 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 SPATC1Q76KD6 591 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 ARPINQ7Z6K5 226 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 OR11L1Q8NGX0 322 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 ERGIC1Q969X5 290 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 ZNF48Q96MX3 618 aaPredicted RBP11.14□□□□□ -0.63
HMGB3-204ENST00000448905 CDADC1Q9BWV3 514 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 POFUT1Q9H488 388 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 PTTG3PQ9NZH4 202 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 CLN8Q9UBY8 286 aa11.14□□□□□ -0.63
HMGB3-204ENST00000448905 COA3Q9Y2R0 106 aaPredicted RBP11.14□□□□□ -0.63
HMGB3-204ENST00000448905 IGHV3OR16-10A0A075B7F0 116 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 NDUFAB1O14561 156 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 ZNF205O95201 554 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 CYB5R3P00387 301 aaPredicted RBP11.13□□□□□ -0.63
HMGB3-204ENST00000448905 KNG1P01042 644 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 LIPFP07098 398 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 IGHV4-38-2P0DP08 117 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 CTLA4P16410 223 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 FPR3P25089 353 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 CRABP1P29762 137 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 PITPNBP48739 271 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 RPS6KA3P51812 740 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 MALLQ13021 153 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 FHL1Q13642 323 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 HLXQ14774 488 aaPredicted RBP11.13□□□□□ -0.63
HMGB3-204ENST00000448905 KCNJ8Q15842 424 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 KCNMB1Q16558 191 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 PDLIM3Q53GG5 364 aaPredicted RBP11.13□□□□□ -0.63
HMGB3-204ENST00000448905 GPR157Q5UAW9 335 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 CD276Q5ZPR3 534 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 TBPL2Q6SJ96 375 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 C17orf107Q6ZR85 190 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 ADCK1Q86TW2 530 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 OR10S1Q8NGN2 331 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 OR4F5Q8NH21 305 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 ZNF420Q8TAQ5 688 aaPredicted RBP11.13□□□□□ -0.63
HMGB3-204ENST00000448905 SLC7A6Q92536 515 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 C1orf147Q96MC9 270 aaPredicted RBP11.13□□□□□ -0.63
HMGB3-204ENST00000448905 SLC30A2Q9BRI3 323 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 NUDT16L1Q9BRJ7 211 aaKnown RBP11.13□□□□□ -0.63
HMGB3-204ENST00000448905 TMEM246Q9BRR3 403 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 HDHD2Q9H0R4 259 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 SYT4Q9H2B2 425 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 NOX4Q9NPH5 578 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 SAR1AQ9NR31 198 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 NOP16Q9Y3C1 178 aaKnown RBP11.13□□□□□ -0.63
HMGB3-204ENST00000448905 MMP24Q9Y5R2 645 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 SNX13Q9Y5W8 968 aa11.13□□□□□ -0.63
HMGB3-204ENST00000448905 MEGF8Q7Z7M0 2845 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 J3KTA2 159 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 CDC42EP2O14613 210 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 FFAR1O14842 300 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 RER1O15258 196 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 HOXA3O43365 443 aaPredicted RBP11.12□□□□□ -0.63
HMGB3-204ENST00000448905 PTP4A3O75365 173 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 PLATP00750 562 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 GPR4P46093 362 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 PAX2Q02962 417 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 ECH1Q13011 328 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 KRR1Q13601 381 aaKnown RBP11.12□□□□□ -0.63
HMGB3-204ENST00000448905 ZNF404Q494X3 552 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 CCDC92Q53HC0 331 aaPredicted RBP11.12□□□□□ -0.63
HMGB3-204ENST00000448905 MESTQ5EB52 335 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 DPY19L2P2Q6ZN68 376 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 FAM122BQ7Z309 247 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 VTCN1Q7Z7D3 282 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 MOGAT3Q86VF5 341 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 CELF2-AS1Q8N7Q2 184 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 OR10AD1Q8NGE0 317 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 FAM71F1Q96KD3 344 aaPredicted RBP11.12□□□□□ -0.63
HMGB3-204ENST00000448905 COQ7Q99807 217 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 HOPXQ9BPY8 73 aaPredicted RBP11.12□□□□□ -0.63
HMGB3-204ENST00000448905 NUAK2Q9H093 628 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 NRIP3Q9NQ35 241 aa11.12□□□□□ -0.63
HMGB3-204ENST00000448905 VSX1Q9NZR4 365 aaPredicted RBP11.12□□□□□ -0.63
HMGB3-204ENST00000448905 AURKCQ9UQB9 309 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms