RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TUBA1AQ71U36 451 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 ZNF786Q8N393 782 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 LRR1Q96L50 414 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 CNBD2Q96M20 576 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 ZNF582Q96NG8 517 aaPredicted RBP11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 RBP7Q96R05 134 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 SNX18Q96RF0 628 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 APOL4Q9BPW4 351 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 PRRG3Q9BZD7 231 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 TMEM129A0AVI4 362 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 TVP23AA6NH52 213 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 CENPBD1B2RD01 187 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 ENTPD6O75354 484 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 KHDRBS3O75525 346 aaKnown RBP11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 APOL3O95236 402 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 PSKH1P11801 424 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 DAOP14920 347 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 PAICSP22234 425 aaKnown RBP11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 THBS4P35443 961 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 EVX1P49640 407 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 SLC25A1P53007 311 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 SNRPGP62308 76 aaKnown RBP11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 APOFQ13790 326 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 MEP1BQ16820 701 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 CR1LQ2VPA4 569 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 THEM4Q5T1C6 240 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 LINC01590Q5TEZ4 76 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 AADACL4Q5VUY2 407 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 C8orf59Q8N0T1 100 aaPredicted RBP11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 ZNF511Q8NB15 262 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 PROKR2Q8NFJ6 384 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 OR8J1Q8NGP2 316 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 OR6K6Q8NGW6 343 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 RHOXF1Q8NHV9 184 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 UBASH3BQ8TF42 649 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 ZMYND19Q96E35 227 aaPredicted RBP11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 EMC7Q9NPA0 242 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 B3GAT2Q9NPZ5 323 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 RAB26Q9ULW5 256 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 CMAHPQ9Y471 501 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 NBEAL1Q6ZS30 2694 aa11.83□□□□□ -0.52
PDLIM2-213ENST00000448520 IGHV2OR16-5A0A0B4J2B6 119 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 ZNF99A8MXY4 864 aaPredicted RBP11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 B4GALT1P15291 398 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 MYF6P23409 242 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 ZNF133P52736 654 aaPredicted RBP11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 RPS7P62081 194 aaKnown RBP11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 IL18R1Q13478 541 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 C10orf128Q5T292 105 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 SHFQ7M4L6 423 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 ZBTB46Q86UZ6 589 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 RFLNBQ8N5W9 214 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 LINC01356Q8N9X3 169 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 SETD9Q8NE22 299 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 OR2T4Q8NH00 348 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 ANKRD60Q9BZ19 345 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 SEC61A2Q9H9S3 476 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 AMBNQ9NP70 447 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 TMEM38BQ9NVV0 291 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 MRPL22Q9NWU5 206 aaKnown RBP11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 UBAP1Q9NZ09 502 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 SPEF1Q9Y4P9 236 aa11.82□□□□□ -0.52
PDLIM2-213ENST00000448520 LRP5LA4QPB2 252 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 AHCYL1O43865 530 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 SELENOFO60613 162 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 LILRA1O75019 489 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 TFP02787 698 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 CELA3BP08861 270 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 MRPL3P09001 348 aaKnown RBP11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 GAAP10253 952 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 PCMT1P22061 227 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 NR4A1P22736 598 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 GSTT1P30711 240 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 RPS27P42677 84 aaKnown RBP11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 CAPZA2P47755 286 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 CDK5R2Q13319 367 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 SGCAQ16586 387 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 NXNL2Q5VZ03 156 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 IL17RELQ6ZVW7 336 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 THAP5Q7Z6K1 395 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 SLC26A10Q8NG04 563 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 FBLIM1Q8WUP2 373 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 C11orf40Q8WZ69 217 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 NABP1Q96AH0 204 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 FOXB1Q99853 325 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 RACGAP1Q9H0H5 632 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 WDR76Q9H967 626 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 DYNLRB1Q9NP97 96 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 CLN6Q9NWW5 311 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 B3GNT2Q9NY97 397 aa11.81□□□□□ -0.52
PDLIM2-213ENST00000448520 ZNF503-AS2A6NEH8 195 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 HAX1O00165 279 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 GLCEO94923 617 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 HLA-DQA2P01906 255 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 PATE4P0C8F1 98 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 APEX1P27695 318 aaKnown RBP11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 LAP3P28838 519 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 CRABP1P29762 137 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 NAA10P41227 235 aaPredicted RBP11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 ZNF84P51523 738 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms