RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 GPR173Q9NS66 373 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 TRAPPC4Q9Y296 219 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 SDCBPO00560 298 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-204ENST00000448183 GLAP06280 429 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 EPXP11678 715 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 CD1CP29017 333 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 HOXC8P31273 242 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 CSNK1EP49674 416 aaKnown RBP7.09□□□□□ -1.27
NEDD9-204ENST00000448183 GSK3AP49840 483 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF626Q68DY1 528 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 TMEM88Q6PEY1 159 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 TEX261Q6UWH6 196 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 BTNL8Q6UX41 500 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 LYG2Q86SG7 212 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 CLRN3Q8NCR9 226 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 WDR89Q96FK6 387 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-204ENST00000448183 TPPP3Q9BW30 176 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 SLIRPQ9GZT3 109 aaKnown RBP7.09□□□□□ -1.27
NEDD9-204ENST00000448183 PDFQ9HBH1 243 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 NGBQ9NPG2 151 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 ASH2LQ9UBL3 628 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 CTSFQ9UBX1 484 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 U3KQ87 197 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 A0A1B0GX78 115 aa7.09□□□□□ -1.28
NEDD9-204ENST00000448183 H0Y8G0 127 aa7.09□□□□□ -1.28
NEDD9-204ENST00000448183 FGF17O60258 216 aa7.09□□□□□ -1.28
NEDD9-204ENST00000448183 ALOX12BO75342 701 aa7.09□□□□□ -1.28
NEDD9-204ENST00000448183 CER1O95813 267 aa7.09□□□□□ -1.28
NEDD9-204ENST00000448183 C4BP0C0L5 1744 aa7.09□□□□□ -1.28
NEDD9-204ENST00000448183 HMGA1P17096 107 aaKnown RBP7.09□□□□□ -1.28
NEDD9-204ENST00000448183 RPL18Q07020 188 aaKnown RBP7.09□□□□□ -1.28
NEDD9-204ENST00000448183 CLLU1Q5K131 121 aa7.09□□□□□ -1.28
NEDD9-204ENST00000448183 FAM74A1Q5RGS3 127 aa7.09□□□□□ -1.28
NEDD9-204ENST00000448183 PRAMEF5Q5TYX0 476 aa7.09□□□□□ -1.28
NEDD9-204ENST00000448183 PRAMEF6Q5VXH4 476 aa7.09□□□□□ -1.28
NEDD9-204ENST00000448183 SLC37A2Q8TED4 501 aa7.09□□□□□ -1.28
NEDD9-204ENST00000448183 PPP1R1CQ8WVI7 109 aa7.09□□□□□ -1.28
NEDD9-204ENST00000448183 JAM3Q9BX67 310 aa7.09□□□□□ -1.28
NEDD9-204ENST00000448183 TRAV1-2A0A0B4J238 106 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 BCL2L11O43521 198 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 IGLV3-25P01717 112 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 GUSBP08236 651 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 TCN2P20062 427 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 DTYMKP23919 212 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 IRS1P35568 1242 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 MMP15P51511 669 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 UBE2G2P60604 165 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF90Q03938 601 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 DPTQ07507 201 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 CYHR1Q6ZMK1 362 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 USP51Q70EK9 711 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 OR4C16Q8NGL9 310 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 MARCH1Q8TCQ1 289 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 SIGLEC11Q96RL6 698 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 ATF6BQ99941 703 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 SHARPINQ9H0F6 387 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 DUSP13Q9UII6 198 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 POMT2Q9UKY4 750 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 K7ESM1 405 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 PI3P19957 117 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 TGM1P22735 817 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 SPANXN5Q5MJ07 72 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 DCAF12Q5T6F0 453 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 GLCCI1Q86VQ1 547 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 LINC01465Q8N7H1 131 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 EXD3Q8N9H8 876 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 OR51F2Q8NH61 342 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF586Q9NXT0 402 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 LTBP4Q8N2S1 1624 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 H3BNC9 293 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 CTSLP07711 333 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 SPNP16150 400 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 EN2P19622 333 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-204ENST00000448183 IL3RAP26951 378 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 HRH1P35367 487 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 UBE2G1P62253 170 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 EDDM3AQ14507 147 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 TMEM268Q5VZI3 342 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 THNSL2Q86YJ6 484 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 BCORP1Q8N888 145 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 KDF1Q8NAX2 398 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-204ENST00000448183 BHLHE23Q8NDY6 225 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 OR13H1Q8NG92 308 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 OR5AP2Q8NGF4 316 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 ANGPTL6Q8NI99 470 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 GPX8Q8TED1 209 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 TMEM18Q96B42 140 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 MAP6Q96JE9 813 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 LAT2Q9GZY6 243 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 ZBP1Q9H171 429 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 GPR84Q9NQS5 396 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 CYSLTR2Q9NS75 346 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 WSB2Q9NYS7 404 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-204ENST00000448183 SLC5A6Q9Y289 635 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 HS3ST3A1Q9Y663 406 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 V9GYS6 101 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 LRP3O75074 770 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 IL5P05113 134 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 QDPRP09417 244 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms