RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 KCNJ8Q15842 424 aa17.28■□□□□ 0.36
FAM3A-215ENST00000447601 C2orf76Q3KRA6 126 aa17.28■□□□□ 0.36
FAM3A-215ENST00000447601 ZFP69Q49AA0 526 aa17.28■□□□□ 0.36
FAM3A-215ENST00000447601 FOXL2NBQ6ZUU3 175 aa17.28■□□□□ 0.36
FAM3A-215ENST00000447601 FOXRED1Q96CU9 486 aaPredicted RBP17.28■□□□□ 0.36
FAM3A-215ENST00000447601 CACNG6Q9BXT2 260 aa17.28■□□□□ 0.36
FAM3A-215ENST00000447601 OR2B2Q9GZK3 357 aa17.28■□□□□ 0.36
FAM3A-215ENST00000447601 NEK6Q9HC98 313 aa17.28■□□□□ 0.36
FAM3A-215ENST00000447601 DDX28Q9NUL7 540 aaKnown RBP17.28■□□□□ 0.36
FAM3A-215ENST00000447601 NUDT15Q9NV35 164 aa17.28■□□□□ 0.36
FAM3A-215ENST00000447601 FREM3P0C091 2139 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 NAP1L6A6NFF2 107 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 STMND1H3BQB6 276 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 SMAD9O15198 467 aaKnown RBP17.27■□□□□ 0.36
FAM3A-215ENST00000447601 RER1O15258 196 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 CTAG2O75638 210 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 TRAPPC6AO75865 159 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 MT-ND4P03905 459 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 GIFP27352 417 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 GDF1P27539 372 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 SUCLG1P53597 346 aaKnown RBP17.27■□□□□ 0.36
FAM3A-215ENST00000447601 CARD18P57730 90 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 GRB2P62993 217 aaKnown RBP17.27■□□□□ 0.36
FAM3A-215ENST00000447601 SPEM2Q0P670 501 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 SGCAQ16586 387 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 GGNQ86UU5 652 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 GCDHQ92947 438 aaPredicted RBP17.27■□□□□ 0.36
FAM3A-215ENST00000447601 SLC25A28Q96A46 364 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 PHF21AQ96BD5 680 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 IP6K3Q96PC2 410 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 NELFAQ9H3P2 528 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 PNRC2Q9NPJ4 139 aaKnown RBP17.27■□□□□ 0.36
FAM3A-215ENST00000447601 RCE1Q9Y256 329 aa17.27■□□□□ 0.36
FAM3A-215ENST00000447601 MRPS18BQ9Y676 258 aaKnown RBP17.27■□□□□ 0.36
FAM3A-215ENST00000447601 A0A0C4DFX4 3053 aa17.27■□□□□ 0.35
FAM3A-215ENST00000447601 A0A1B0GVI7 797 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 GGT3PA6NGU5 568 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 A8MV72 311 aaPredicted RBP17.26■□□□□ 0.35
FAM3A-215ENST00000447601 TMIGD3P0DMS9 266 aaPredicted RBP17.26■□□□□ 0.35
FAM3A-215ENST00000447601 CAPZA1P52907 286 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 RAB25P57735 213 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 PLA2G7Q13093 441 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 DCAF10Q5QP82 559 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 GLYATL3Q5SZD4 288 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 ZIC4Q8N9L1 334 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 OR51A2Q8NGJ7 313 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 ADAMTS17Q8TE56 1095 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 FGGYQ96C11 551 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 ZNF416Q9BWM5 594 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 B3GNT4Q9C0J1 378 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 FOXD3Q9UJU5 478 aaPredicted RBP17.26■□□□□ 0.35
FAM3A-215ENST00000447601 LOC390937A0A1W2PQ73 354 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 DHHO43323 396 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 POU3F2P20265 443 aaPredicted RBP17.26■□□□□ 0.35
FAM3A-215ENST00000447601 CD96P40200 585 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 EFNB2P52799 333 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 NKX2-5P52952 324 aaPredicted RBP17.26■□□□□ 0.35
FAM3A-215ENST00000447601 RAG2P55895 527 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 SPOCK1Q08629 439 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 TRIP6Q15654 476 aaKnown RBP17.26■□□□□ 0.35
FAM3A-215ENST00000447601 WIPI1Q5MNZ9 446 aaPredicted RBP17.26■□□□□ 0.35
FAM3A-215ENST00000447601 DNM1P46Q6ZS02 220 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 JAGN1Q8N5M9 183 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 OR2V1Q8NHB1 315 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 AKAP1Q92667 903 aaKnown RBP eCLIP17.26■□□□□ 0.354e-9■■■■■ 32.4
FAM3A-215ENST00000447601 FAM173AQ9BQD7 235 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 UTP23Q9BRU9 249 aaKnown RBP17.26■□□□□ 0.35
FAM3A-215ENST00000447601 ULBP2Q9BZM5 246 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 POU2F3Q9UKI9 436 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 N6AMT1Q9Y5N5 214 aa17.26■□□□□ 0.35
FAM3A-215ENST00000447601 PCSK5Q92824 1860 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 TMEM272A0A1B0GTI8 110 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 ANKRD20A5PA0PJZ0 165 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 LINC01387J3KSC0 135 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 LMX1BO60663 402 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 ITGA3P26006 1051 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 SELENOPP49908 381 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 ZNF84P51523 738 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 PRKXP51817 358 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 RRAS2P62070 204 aaPredicted RBP17.25■□□□□ 0.35
FAM3A-215ENST00000447601 FOXO1Q12778 655 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 PHYHD1Q5SRE7 291 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 C1orf100Q5SVJ3 147 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 SPINK14Q6IE38 97 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 C20orf196Q8IYI0 205 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 SUMF1Q8NBK3 374 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 SORCS2Q96PQ0 1159 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 ACTR6Q9GZN1 396 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 RANGRFQ9HD47 186 aaPredicted RBP17.25■□□□□ 0.35
FAM3A-215ENST00000447601 HRASLSQ9HDD0 168 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 KLK11Q9UBX7 282 aa17.25■□□□□ 0.35
FAM3A-215ENST00000447601 CGGBP1Q9UFW8 167 aaPredicted RBP17.25■□□□□ 0.35
FAM3A-215ENST00000447601 DCDC2BA2VCK2 349 aa17.24■□□□□ 0.35
FAM3A-215ENST00000447601 PINLYPA6NC86 204 aa17.24■□□□□ 0.35
FAM3A-215ENST00000447601 F10P00742 488 aa17.24■□□□□ 0.35
FAM3A-215ENST00000447601 BDKRB2P30411 391 aa17.24■□□□□ 0.35
FAM3A-215ENST00000447601 GNALP38405 381 aa17.24■□□□□ 0.35
FAM3A-215ENST00000447601 CX3CR1P49238 355 aa17.24■□□□□ 0.35
FAM3A-215ENST00000447601 ZNF121P58317 390 aaPredicted RBP17.24■□□□□ 0.35
FAM3A-215ENST00000447601 AIMP2Q13155 320 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms