RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 SLC46A2Q9BY10 475 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 KCNIP1Q9NZI2 227 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 LHX6Q9UPM6 363 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 HEPACAM2A8MVW5 462 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 LANCL1O43813 399 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 OR7C2O60412 319 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 MOSPD3O75425 235 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 DUS4LO95620 317 aaKnown RBP4.7□□□□□ -1.66
SCN11A-202ENST00000444237 OR5G3P0C626 314 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 ZNF16P17020 682 aaPredicted RBP4.7□□□□□ -1.66
SCN11A-202ENST00000444237 PGCP20142 388 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 HMGA2P52926 109 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 RAB31Q13636 194 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 CRMP1Q14194 572 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 SYPL1Q16563 259 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 CTSL3PQ5NE16 218 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 STUMQ69YW2 141 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 DPPA3Q6W0C5 159 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 SYT13Q7L8C5 426 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 SCAMP5Q8TAC9 235 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 KCNG3Q8TAE7 436 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 APH1AQ96BI3 265 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 MRGPRX4Q96LA9 322 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 LRRC3BQ96PB8 259 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 HIST1H2AAQ96QV6 131 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 PDCD1LG2Q9BQ51 273 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 PLAC1Q9HBJ0 212 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 PRSS16Q9NQE7 514 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 ZNF331Q9NQX6 463 aaPredicted RBP4.7□□□□□ -1.66
SCN11A-202ENST00000444237 KCNE5Q9UJ90 142 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 KLF2Q9Y5W3 355 aaPredicted RBP4.7□□□□□ -1.66
SCN11A-202ENST00000444237 TBC1D3KA0A087X1G2 549 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 DUXBA0A1W2PPF3 345 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 TBC1D3BA6NDS4 549 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 TBC1D3FA6NER0 549 aaPredicted RBP4.7□□□□□ -1.66
SCN11A-202ENST00000444237 H0YIV9 168 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 TNFSF12O43508 249 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 FRS3O43559 492 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 OR2J2O76002 312 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 OR2A4O95047 310 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 CNOT4O95628 575 aaKnown RBP4.7□□□□□ -1.66
SCN11A-202ENST00000444237 CYB5R3P00387 301 aaPredicted RBP4.7□□□□□ -1.66
SCN11A-202ENST00000444237 TRGC2P03986 189 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 CTSAP10619 480 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 SLC11A1P49279 550 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 CTXN1P60606 82 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 SQSTM1Q13501 440 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 GPR18Q14330 331 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 TMEM241Q24JQ0 296 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 AGBL4Q5VU57 503 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 TBC1D3GQ6DHY5 549 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 NKAIN4Q8IVV8 208 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 TMEM183AQ8IXX5 376 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 OR2L13Q8N349 312 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 OR4K14Q8NGD5 310 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 LPPQ93052 612 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 ANAPC16Q96DE5 110 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 DERL3Q96Q80 235 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 OR2A7Q96R45 310 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 G6PC3Q9BUM1 346 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 ZNF430Q9H8G1 570 aaPredicted RBP4.7□□□□□ -1.66
SCN11A-202ENST00000444237 ENY2Q9NPA8 101 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 PLEKHJ1Q9NW61 149 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 TAF1LQ8IZX4 1826 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 BAZ2AQ9UIF9 1905 aaKnown RBP4.7□□□□□ -1.66
SCN11A-202ENST00000444237 SMIM35A0A1B0GVV1 85 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 C9orf170A2RU37 121 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 SCDO00767 359 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 ZNF728P0DKX0 622 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 ADH5P11766 374 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 AADACP22760 399 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 PXNP49023 591 aaPredicted RBP4.7□□□□□ -1.66
SCN11A-202ENST00000444237 BPIFB3P59826 476 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 ACTR1AP61163 376 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 TRA2BP62995 288 aaKnown RBP4.7□□□□□ -1.66
SCN11A-202ENST00000444237 DOC2BQ14184 412 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 IHHQ14623 411 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 TMPPEQ6ZT21 453 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 LRRC25Q8N386 305 aaPredicted RBP4.7□□□□□ -1.66
SCN11A-202ENST00000444237 PNPLA1Q8N8W4 532 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 OR2T10Q8NGZ9 312 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 OR51Q1Q8NH59 317 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 RPUSD4Q96CM3 377 aaKnown RBP4.7□□□□□ -1.66
SCN11A-202ENST00000444237 FBXO4Q9UKT5 387 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 CLDN16Q9Y5I7 305 aa4.7□□□□□ -1.66
SCN11A-202ENST00000444237 TRAV27A0A087WT01 109 aa4.69□□□□□ -1.66
SCN11A-202ENST00000444237 HSPB2A8KAH6 182 aa4.69□□□□□ -1.66
SCN11A-202ENST00000444237 MASP2O00187 686 aa4.69□□□□□ -1.66
SCN11A-202ENST00000444237 IGHV2-70P01814 119 aa4.69□□□□□ -1.66
SCN11A-202ENST00000444237 ACKR3P25106 362 aa4.69□□□□□ -1.66
SCN11A-202ENST00000444237 MPGP29372 298 aa4.69□□□□□ -1.66
SCN11A-202ENST00000444237 NKX2-1P43699 371 aaPredicted RBP4.69□□□□□ -1.66
SCN11A-202ENST00000444237 GABRA4P48169 554 aa4.69□□□□□ -1.66
SCN11A-202ENST00000444237 MEF2AQ02078 507 aaPredicted RBP4.69□□□□□ -1.66
SCN11A-202ENST00000444237 HSPB2Q16082 182 aa4.69□□□□□ -1.66
SCN11A-202ENST00000444237 RPL7L1Q6DKI1 246 aaKnown RBP4.69□□□□□ -1.66
SCN11A-202ENST00000444237 WDR73Q6P4I2 378 aa4.69□□□□□ -1.66
SCN11A-202ENST00000444237 BRICD5Q6PL45 260 aa4.69□□□□□ -1.66
SCN11A-202ENST00000444237 STAC2Q6ZMT1 411 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms