RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 DCAF12L2Q5VW00 463 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 LCN10Q6JVE6 187 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 FGGYQ96C11 551 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 FOXRED1Q96CU9 486 aaPredicted RBP14.25□□□□□ -0.13
SHQ1-202ENST00000444040 TINAGL1Q9GZM7 467 aaPredicted RBP14.25□□□□□ -0.13
SHQ1-202ENST00000444040 PISDQ9UG56 409 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 RARRES3Q9UL19 164 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 WIF1Q9Y5W5 379 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 IGHV5-10-1A0A0J9YXX1 117 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 GOSR2O14653 212 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 CD74P04233 296 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 ZNF35P13682 527 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 EPHA8P29322 1005 aaPredicted RBP14.25□□□□□ -0.13
SHQ1-202ENST00000444040 GPR85P60893 370 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 SEC61A1P61619 476 aaKnown RBP14.25□□□□□ -0.13
SHQ1-202ENST00000444040 CCL7P80098 99 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 RIPPLY1Q0D2K3 151 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 NHLRC3Q5JS37 347 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 CNTD2Q9H8S5 307 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 GDF2Q9UK05 429 aaPredicted RBP14.25□□□□□ -0.13
SHQ1-202ENST00000444040 M0QYG6 137 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 OR2J2O76002 312 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 ZFAND5O76080 213 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 RGS11O94810 467 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 CRYZL1O95825 349 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 RAB6AP20340 208 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 LAP3P28838 519 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 MPPED2Q15777 294 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 IDO2Q6ZQW0 420 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 PAQR4Q8N4S7 273 aaPredicted RBP14.24□□□□□ -0.13
SHQ1-202ENST00000444040 OR10H5Q8NGA6 315 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 POFUT1Q9H488 388 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 ZNF107Q9UII5 783 aaPredicted RBP14.24□□□□□ -0.13
SHQ1-202ENST00000444040 KLK13Q9UKR3 277 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 ADAMTS9Q9P2N4 1935 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 F5H5P2 479 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 PDGFAP04085 211 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 RRASP10301 218 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 BDKRB2P30411 391 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 EIF1AXP47813 144 aaKnown RBP14.24□□□□□ -0.13
SHQ1-202ENST00000444040 THEM4Q5T1C6 240 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 C3P1Q6ZMU1 363 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 COMMD7Q86VX2 200 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 AQP3Q92482 292 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 ADAT3Q96EY9 351 aaPredicted RBP14.24□□□□□ -0.13
SHQ1-202ENST00000444040 SLC25A21Q9BQT8 299 aaPredicted RBP14.24□□□□□ -0.13
SHQ1-202ENST00000444040 PBOV1Q9GZY1 135 aa14.24□□□□□ -0.13
SHQ1-202ENST00000444040 A0A1W2PPL8 197 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 TMEM235A6NFC5 223 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 RAB27BO00194 218 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 DKK1O94907 266 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 HSD11B1P28845 292 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 FOXK1P85037 733 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 NR0B2Q15466 257 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 C4orf46Q504U0 113 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 FAM209AQ5JX71 171 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 ADPRHL1Q8NDY3 354 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 OR52N4Q8NGI2 321 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 TNFAIP8L1Q8WVP5 186 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 EDEM2Q9BV94 578 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 DUSP23Q9BVJ7 150 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 SDHAF3Q9NRP4 125 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 UPB1Q9UBR1 384 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 TMEM82A0PJX8 343 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 TUBAL3A6NHL2 446 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 H3BUI4 141 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 OPN1LWP04000 364 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 OR4E1P0C645 316 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 PGA4P0DJD7 388 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 PGA3P0DJD8 388 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 QRFPP83859 136 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 ZNF260Q3ZCT1 412 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 TSSK4Q6SA08 328 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 CFAP77Q6ZQR2 320 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 ACBD4Q8NC06 268 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 CRB3Q9BUF7 120 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 METTL7AQ9H8H3 244 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 TMEM138Q9NPI0 162 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 FBXL2Q9UKC9 423 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 RAB22AQ9UL26 194 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 LHFPL6Q9Y693 200 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 ARPC5O15511 151 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 PMS2P2O95744 297 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 CYB5AP00167 134 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 AMY2AP04746 511 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 DCNP07585 359 aaKnown RBP14.23□□□□□ -0.13
SHQ1-202ENST00000444040 CAPZA1P52907 286 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 CLDN6P56747 220 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 RAB14P61106 215 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 MFAP5Q13361 173 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 UNC119Q13432 240 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 HLXQ14774 488 aaPredicted RBP14.23□□□□□ -0.13
SHQ1-202ENST00000444040 C3orf33Q6P1S2 294 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 ZNF529Q6P280 563 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 KLHL24Q6TFL4 600 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 UEVLDQ8IX04 471 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 OR2M3Q8NG83 312 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 OR1J2Q8NGS2 313 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 TMEM185BQ9H7F4 350 aa14.23□□□□□ -0.13
SHQ1-202ENST00000444040 PTGES2Q9H7Z7 377 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms