RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 SLC2A5P22732 501 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 TGFBR2P37173 567 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 SLCO1A2P46721 670 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 SSR4P51571 173 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 CAV2P51636 162 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 PRKXP51817 358 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 RHOAP61586 193 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 STXBP1P61764 594 aaKnown RBP3.73□□□□□ -1.81
VPS50-206ENST00000443443 RPL31P62899 125 aaKnown RBP3.73□□□□□ -1.81
VPS50-206ENST00000443443 RPL8P62917 257 aaKnown RBP3.73□□□□□ -1.81
VPS50-206ENST00000443443 PRKCDQ05655 676 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 ZNF33BQ06732 778 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 ASAH1Q13510 395 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 ACSM3Q53FZ2 586 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 CARD16Q5EG05 197 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 SPIN3Q5JUX0 258 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 CCNJQ5T5M9 372 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 METTL21CQ5VZV1 264 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 OR52E8Q6IFG1 317 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 ANKRD26P1Q6NSI1 321 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 FAM45BPQ6NSW5 357 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 NIPAL1Q6NVV3 410 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 DNM1P34Q6PK57 102 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 STAC2Q6ZMT1 411 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 FRRS1Q6ZNA5 592 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 PRSS48Q7RTY5 328 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 RALGPS2Q86X27 583 aaPredicted RBP3.73□□□□□ -1.81
VPS50-206ENST00000443443 PDIK1LQ8N165 341 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 STPG2Q8N412 459 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 RIBC1Q8N443 379 aaPredicted RBP3.73□□□□□ -1.81
VPS50-206ENST00000443443 LRRC52Q8N7C0 313 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 ACBD4Q8NC06 268 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 PIGXQ8TBF5 258 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 FAM45AQ8TCE6 357 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 APH1BQ8WW43 257 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 FLYWCH2Q96CP2 140 aaKnown RBP3.73□□□□□ -1.81
VPS50-206ENST00000443443 YIPF6Q96EC8 236 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 SEC22AQ96IW7 307 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 SLC22A4Q9H015 551 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 MFSD1Q9H3U5 465 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 UBE2ZQ9H832 354 aaPredicted RBP3.73□□□□□ -1.81
VPS50-206ENST00000443443 PLEKHA3Q9HB20 300 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 TAS2R16Q9NYV7 291 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 WRAP73Q9P2S5 460 aaPredicted RBP3.73□□□□□ -1.81
VPS50-206ENST00000443443 ARL2BPQ9Y2Y0 163 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 RPL36Q9Y3U8 105 aaKnown RBP3.73□□□□□ -1.81
VPS50-206ENST00000443443 MMACHCQ9Y4U1 282 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 A0A1B0GTH9 108 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.72□□□□□ -1.81
VPS50-206ENST00000443443 A0A1B0GW55 424 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.72□□□□□ -1.81
VPS50-206ENST00000443443 USP27XA6NNY8 438 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 LYRM9A8MSI8 78 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 MPTX1A8MV57 137 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 ZNF487B1APH4 448 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 C9J4A7 227 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 UGT1A9O60656 530 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 LYPD3O95274 346 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 SERPINA1P01009 418 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 IGHV3-13P01766 116 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 TCRBP04435 133 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 SNRPAP09012 282 aaKnown RBP3.72□□□□□ -1.81
VPS50-206ENST00000443443 HOXD4P09016 255 aaPredicted RBP3.72□□□□□ -1.81
VPS50-206ENST00000443443 TACSTD2P09758 323 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 DUX4L2P0CJ85 424 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 DUX4L3P0CJ86 424 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 DUX4L4P0CJ87 422 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 DUX4L5P0CJ88 424 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 DUX4L6P0CJ89 424 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 DUX4L7P0CJ90 424 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 GFAPP14136 432 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 CSNK2A2P19784 350 aaPredicted RBP3.72□□□□□ -1.81
VPS50-206ENST00000443443 CELP19835 753 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 ME2P23368 584 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 DDOSTP39656 456 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 MAGEA12P43365 314 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 OMPP47874 163 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 TFPI2P48307 235 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 HCAR3P49019 387 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 IDH3GP51553 393 aaPredicted RBP3.72□□□□□ -1.81
VPS50-206ENST00000443443 LSM6P62312 80 aaKnown RBP3.72□□□□□ -1.81
VPS50-206ENST00000443443 HMGCS1Q01581 520 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 PAX8Q06710 450 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 MLLT11Q13015 90 aaPredicted RBP3.72□□□□□ -1.81
VPS50-206ENST00000443443 SRSF6Q13247 344 aaKnown RBP3.72□□□□□ -1.81
VPS50-206ENST00000443443 CPTPQ5TA50 214 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 FRMPD2BQ6IN97 320 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 C3orf33Q6P1S2 294 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 DUX4L9Q6RFH8 374 aaPredicted RBP3.72□□□□□ -1.81
VPS50-206ENST00000443443 LCLAT1Q6UWP7 414 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 NAXDQ8IW45 347 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 PRELID2Q8N945 189 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 ACOT4Q8N9L9 421 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 WDR31Q8NA23 367 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 ZNF740Q8NDX6 193 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 OR2T33Q8NG76 320 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 OR9Q2Q8NGE9 314 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 OR2D3Q8NGH3 330 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 OR2G2Q8NGZ5 317 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 OR1L3Q8NH93 324 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms