RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 ACSM4P0C7M7 580 aa16.5■□□□□ 0.23
POLR1E-203ENST00000442009 UBCP0CG48 685 aaKnown RBP16.5■□□□□ 0.23
POLR1E-203ENST00000442009 CFPP27918 469 aa16.5■□□□□ 0.23
POLR1E-203ENST00000442009 C3AR1Q16581 482 aa16.5■□□□□ 0.23
POLR1E-203ENST00000442009 CCDC92Q53HC0 331 aaPredicted RBP16.5■□□□□ 0.23
POLR1E-203ENST00000442009 BCL2L15Q5TBC7 163 aa16.5■□□□□ 0.23
POLR1E-203ENST00000442009 PRSS45Q7RTY3 260 aa16.5■□□□□ 0.23
POLR1E-203ENST00000442009 GDPD1Q8N9F7 314 aa16.5■□□□□ 0.23
POLR1E-203ENST00000442009 OR5H6Q8NGV6 325 aa16.5■□□□□ 0.23
POLR1E-203ENST00000442009 TRMT10AQ8TBZ6 339 aaKnown RBP16.5■□□□□ 0.23
POLR1E-203ENST00000442009 SLITRK2Q9H156 845 aa16.5■□□□□ 0.23
POLR1E-203ENST00000442009 LDAHQ9H6V9 325 aa16.5■□□□□ 0.23
POLR1E-203ENST00000442009 MOB1AQ9H8S9 216 aa16.5■□□□□ 0.23
POLR1E-203ENST00000442009 PARPBPQ9NWS1 579 aa16.5■□□□□ 0.23
POLR1E-203ENST00000442009 EMC3Q9P0I2 261 aa16.5■□□□□ 0.23
POLR1E-203ENST00000442009 ADAM30Q9UKF2 790 aa16.5■□□□□ 0.23
POLR1E-203ENST00000442009 NOSIPQ9Y314 301 aaKnown RBP16.5■□□□□ 0.23
POLR1E-203ENST00000442009 A0A1B0GVC2 190 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 LOC107986453A0A1B0GWG9 222 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 CST2P09228 141 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 IGFBP3P17936 291 aaPredicted RBP16.49■□□□□ 0.23
POLR1E-203ENST00000442009 OTX1P32242 354 aaPredicted RBP16.49■□□□□ 0.23
POLR1E-203ENST00000442009 GRB2P62993 217 aaKnown RBP16.49■□□□□ 0.23
POLR1E-203ENST00000442009 FOXC1Q12948 553 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 RNPS1Q15287 305 aaKnown RBP16.49■□□□□ 0.23
POLR1E-203ENST00000442009 BAK1Q16611 211 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 TUSC5Q8IXB3 177 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 SAMD12Q8N8I0 201 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 TSEN15Q8WW01 171 aaKnown RBP16.49■□□□□ 0.23
POLR1E-203ENST00000442009 ALKBH3Q96Q83 286 aaPredicted RBP16.49■□□□□ 0.23
POLR1E-203ENST00000442009 SPATA2Q9UM82 520 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 DHDHQ9UQ10 334 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 A0A1B0GTI1 187 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 TTLL8A6PVC2 850 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 H3BSH0 61 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 RPL36A-HNRNPH2H7BZ11 118 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 MRPL33O75394 65 aaKnown RBP16.49■□□□□ 0.23
POLR1E-203ENST00000442009 EIF4EP06730 217 aaKnown RBP16.49■□□□□ 0.23
POLR1E-203ENST00000442009 ZNF24P17028 368 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 FSTP19883 344 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 SPINK2P20155 84 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 STK11Q15831 433 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 TSPO2Q5TGU0 170 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 LRRC18Q8N456 261 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 ZNF433Q8N7K0 673 aaPredicted RBP16.49■□□□□ 0.23
POLR1E-203ENST00000442009 SNIP1Q8TAD8 396 aaKnown RBP16.49■□□□□ 0.23
POLR1E-203ENST00000442009 CMTM3Q96MX0 182 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 KCNJ15Q99712 375 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 SCNM1Q9BWG6 230 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 SLCO5A1Q9H2Y9 848 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 FOXJ3Q9UPW0 622 aa16.49■□□□□ 0.23
POLR1E-203ENST00000442009 PCDHGA9Q9Y5G4 932 aaKnown RBP16.49■□□□□ 0.23
POLR1E-203ENST00000442009 A0A0B4J203 849 aa16.48■□□□□ 0.23
POLR1E-203ENST00000442009 P2RY10O00398 339 aa16.48■□□□□ 0.23
POLR1E-203ENST00000442009 TFECO14948 347 aaPredicted RBP16.48■□□□□ 0.23
POLR1E-203ENST00000442009 APOA1P02647 267 aa16.48■□□□□ 0.23
POLR1E-203ENST00000442009 YES1P07947 543 aa16.48■□□□□ 0.23
POLR1E-203ENST00000442009 SNRPBP14678 240 aaKnown RBP16.48■□□□□ 0.23
POLR1E-203ENST00000442009 HSD11B1P28845 292 aa16.48■□□□□ 0.23
POLR1E-203ENST00000442009 PSMD7P51665 324 aa16.48■□□□□ 0.23
POLR1E-203ENST00000442009 PRKXP51817 358 aa16.48■□□□□ 0.23
POLR1E-203ENST00000442009 P2RY14Q15391 338 aa16.48■□□□□ 0.23
POLR1E-203ENST00000442009 CEACAM16Q2WEN9 425 aa16.48■□□□□ 0.23
POLR1E-203ENST00000442009 NRN1LQ496H8 165 aa16.48■□□□□ 0.23
POLR1E-203ENST00000442009 PRDM14Q9GZV8 571 aa16.48■□□□□ 0.23
POLR1E-203ENST00000442009 C14orf119Q9NWQ9 140 aa16.48■□□□□ 0.23
POLR1E-203ENST00000442009 ZNF319Q9P2F9 582 aa16.48■□□□□ 0.23
POLR1E-203ENST00000442009 DOK2O60496 412 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 WISP2O76076 250 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 CD2P06729 351 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 ANOS1P23352 680 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 ZNF121P58317 390 aaPredicted RBP16.47■□□□□ 0.23
POLR1E-203ENST00000442009 TAF13Q15543 124 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 ELFN2Q5R3F8 820 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 ADGRE4PQ86SQ3 457 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 MED12LQ86YW9 2145 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 MINDY2Q8NBR6 621 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 COX4I2Q96KJ9 171 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 FOXB1Q99853 325 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 MRI1Q9BV20 369 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 EXO5Q9H790 373 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 BRD7Q9NPI1 651 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 PLSCR2Q9NRY7 297 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 SLC7A10Q9NS82 523 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 ZNF275Q9NSD4 429 aaPredicted RBP16.47■□□□□ 0.23
POLR1E-203ENST00000442009 SLC5A6Q9Y289 635 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 SPTBN4Q9H254 2564 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 DMXL2Q8TDJ6 3036 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 CACNA1GO43497 2377 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 OR6C65A6NJZ3 312 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 IL7P13232 177 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.47■□□□□ 0.23
POLR1E-203ENST00000442009 SLC22A24Q8N4F4 322 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 ZADH2Q8N4Q0 377 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 OR4M1Q8NGD0 313 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 PRRG4Q9BZD6 226 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 GP6Q9HCN6 339 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 EXTL2Q9UBQ6 330 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 ZNF175Q9Y473 711 aa16.47■□□□□ 0.23
POLR1E-203ENST00000442009 LAMA5O15230 3695 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms