RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 PRR3P79522 188 aaKnown RBP2.67□□□□□ -1.98
PFDN4-202ENST00000441080 PIGHQ14442 188 aaPredicted RBP2.67□□□□□ -1.98
PFDN4-202ENST00000441080 CHRFAM7AQ494W8 412 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 CENPQQ7L2Z9 268 aaPredicted RBP2.67□□□□□ -1.98
PFDN4-202ENST00000441080 MRPL55Q7Z7F7 128 aaKnown RBP2.67□□□□□ -1.98
PFDN4-202ENST00000441080 CDKL3Q8IVW4 592 aaPredicted RBP2.67□□□□□ -1.98
PFDN4-202ENST00000441080 COX18Q8N8Q8 333 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 NECAP1Q8NC96 275 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 CHST4Q8NCG5 386 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 OR52P1PQ8NH57 321 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 LINC01560Q8TB33 94 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 APH1BQ8WW43 257 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 RMI2Q96E14 147 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 HSD17B10Q99714 261 aaKnown RBP2.67□□□□□ -1.98
PFDN4-202ENST00000441080 OR52D1Q9H346 318 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 TSSC4Q9Y5U2 329 aaPredicted RBP2.67□□□□□ -1.98
PFDN4-202ENST00000441080 COL1A2P08123 1366 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 NINLQ9Y2I6 1382 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 IGLV3-12A0A075B6K2 115 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 IGKV1D-17A0A075B6S4 117 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 A0A1B0GW55 424 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 H7C417 338 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 K7EMT4 169 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 SOCS1O15524 211 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 CDC40O60508 579 aaKnown RBP eCLIP2.66□□□□□ -1.98
PFDN4-202ENST00000441080 AGTP01019 485 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 CD5P06127 495 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 DUX4L2P0CJ85 424 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 DUX4L3P0CJ86 424 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 DUX4L5P0CJ88 424 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 DUX4L6P0CJ89 424 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 DUX4L7P0CJ90 424 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 MYL2P10916 166 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 ATF6P18850 670 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 KIR3DL2P43630 455 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 ZNF816Q0VGE8 651 aaPredicted RBP2.66□□□□□ -1.98
PFDN4-202ENST00000441080 TRAM2Q15035 370 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 PGGHGQ32M88 737 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 ALKBH6Q3KRA9 238 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 TCEAL5Q5H9L2 206 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 ZFP1Q6P2D0 407 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 TTC23LQ6PF05 361 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 SLC16A13Q7RTY0 426 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 NPWQ8N729 165 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 OR4C5Q8NGB2 326 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 OR52E2Q8NGJ4 325 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 LILRB4Q8NHJ6 448 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 LYPD6BQ8NI32 183 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 TCEAL3Q969E4 200 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 DCPSQ96C86 337 aaKnown RBP2.66□□□□□ -1.98
PFDN4-202ENST00000441080 TGS1Q96RS0 853 aaKnown RBP2.66□□□□□ -1.98
PFDN4-202ENST00000441080 FOXC2Q99958 501 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 TMEM165Q9HC07 324 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 NEK6Q9HC98 313 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 MTCH1Q9NZJ7 389 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 DUX4Q9UBX2 424 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 MTFP1Q9UDX5 166 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 RABL2BQ9UNT1 228 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 SLC17A4Q9Y2C5 497 aa2.66□□□□□ -1.98
PFDN4-202ENST00000441080 KIF26AQ9ULI4 1882 aaPredicted RBP2.66□□□□□ -1.98
PFDN4-202ENST00000441080 TRAV19A0A0A6YYK7 116 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 CTAGE15A4D2H0 777 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 ZNF850A8MQ14 1090 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 RPL36A-HNRNPH2H7BZ11 118 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 DNASE2O00115 360 aaPredicted RBP2.65□□□□□ -1.99
PFDN4-202ENST00000441080 NVLO15381 856 aaKnown RBP2.65□□□□□ -1.99
PFDN4-202ENST00000441080 REM1O75628 298 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 FLOT1O75955 427 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 IGKV1-17P01599 117 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 IL4P05112 153 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 DCNP07585 359 aaKnown RBP2.65□□□□□ -1.99
PFDN4-202ENST00000441080 CTSLP07711 333 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 OR8U9P0C7N5 309 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 GTF2E2P29084 291 aaKnown RBP2.65□□□□□ -1.99
PFDN4-202ENST00000441080 SYNJ2BPP57105 145 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 RGS8P57771 180 aaPredicted RBP2.65□□□□□ -1.99
PFDN4-202ENST00000441080 LIPEQ05469 1076 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 IFT88Q13099 833 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 MPV17L2Q567V2 206 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 AP1ARQ63HQ0 302 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 CTAGE6Q86UF2 777 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 MYOCDQ8IZQ8 938 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 OR6N1Q8NGY5 312 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 FAM81AQ8TBF8 368 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 CHP1Q99653 195 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 ANKRD60Q9BZ19 345 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 ULBP2Q9BZM5 246 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 TMEM185BQ9H7F4 350 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 SLC38A10Q9HBR0 1119 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 RETNQ9HD89 108 aa2.65□□□□□ -1.99
PFDN4-202ENST00000441080 MARCOQ9UEW3 520 aaPredicted RBP2.65□□□□□ -1.99
PFDN4-202ENST00000441080 H0YJW9 148 aa2.64□□□□□ -1.99
PFDN4-202ENST00000441080 HUS1O60921 280 aa2.64□□□□□ -1.99
PFDN4-202ENST00000441080 SLC22A5O76082 557 aa2.64□□□□□ -1.99
PFDN4-202ENST00000441080 SEMA3DO95025 777 aa2.64□□□□□ -1.99
PFDN4-202ENST00000441080 ZNF688P0C7X2 276 aa2.64□□□□□ -1.99
PFDN4-202ENST00000441080 BCKDHBP21953 392 aa2.64□□□□□ -1.99
PFDN4-202ENST00000441080 OR1E1P30953 314 aa2.64□□□□□ -1.99
PFDN4-202ENST00000441080 MRPL19P49406 292 aaKnown RBP2.64□□□□□ -1.99
PFDN4-202ENST00000441080 C21orf59P57076 290 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms