RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 AGTR1P30556 359 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 BTN1A1Q13410 526 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 MOGAT2Q3SYC2 334 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 TFAP2EQ6VUC0 442 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 ZNF441Q8N8Z8 693 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 OR13C8Q8NGS7 320 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 GAL3ST1Q99999 423 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 OR11A1Q9GZK7 315 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 SLC25A32Q9H2D1 315 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 GLS2Q9UI32 602 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 DCDC2BA2VCK2 349 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 D6RAR5 112 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 FTCDNL1E5RQL4 147 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 RAB6AP20340 208 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 SPOCK1Q08629 439 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 DHRS2Q13268 280 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 PCK2Q16822 640 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 BEST3Q8N1M1 668 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 BPIFB2Q8N4F0 458 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 NKAIN3Q8N8D7 197 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 SLC26A10Q8NG04 563 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 DAZLQ92904 295 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 RAB33BQ9H082 229 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 SLC2A8Q9NY64 477 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 DHCR7Q9UBM7 475 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 ZNF230Q9UIE0 474 aaPredicted RBP14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 GPR160Q9UJ42 338 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 FBXL2Q9UKC9 423 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 OR52A1Q9UKL2 312 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 A0A0D9SG52 128 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 ADAM10O14672 748 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 TSPAN4O14817 238 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 CFIP05156 583 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 ATF4P18848 351 aaPredicted RBP14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 OR1D5P58170 312 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 FGL1Q08830 312 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 HYAL4Q2M3T9 481 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 PHF19Q5T6S3 580 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 C5orf46Q6UWT4 87 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 ZNF546Q86UE3 836 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 JAGN1Q8N5M9 183 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 ST7LQ8TDW4 575 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 ST8SIA2Q92186 375 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 AQP3Q92482 292 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 SLC6A7Q99884 636 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 FBXO4Q9UKT5 387 aa14.65□□□□□ -0.06
CLCNKA-203ENST00000439316 TEX46H3BTG2 121 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 OR2T1O43869 369 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 HLA-DOBP13765 273 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 ZNF28P17035 718 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 NAGAP17050 411 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 MPZP25189 248 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 CD34P28906 385 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 EPHA8P29322 1005 aaPredicted RBP14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 ZNF345Q14585 488 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 MEF2DQ14814 521 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 HLA-BQ31612 363 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 OR10K2Q6IF99 312 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 PAPD4Q6PIY7 484 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 CORO6Q6QEF8 472 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 ZNF704Q6ZNC4 412 aaPredicted RBP14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 SLC29A4Q7RTT9 530 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 STPG2Q8N412 459 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 KCNRGQ8N5I3 272 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 OR4D6Q8NGJ1 314 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 OR1N1Q8NGS0 311 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 ZDHHC12Q96GR4 267 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 ZC3H10Q96K80 434 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 MS4A7Q9GZW8 240 aaPredicted RBP14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 COPS7AQ9UBW8 275 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 GDF2Q9UK05 429 aaPredicted RBP14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 PCNX3Q9H6A9 2034 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 TMEM235A6NFC5 223 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 OR5H14A6NHG9 310 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 A6NIZ1 184 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 LMX1BO60663 402 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 SLC25A4P12235 298 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 GLB1P16278 677 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 IL11P20809 199 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 CAPZA1P52907 286 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 RAP1BP61224 184 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 RAP1AP62834 184 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 DCXRQ7Z4W1 244 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 ZNF584Q8IVC4 421 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 OR6S1Q8NH40 331 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 ASB10Q8WXI3 467 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 FOXRED1Q96CU9 486 aaPredicted RBP14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 LDAHQ9H6V9 325 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 ZMAT3Q9HA38 289 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 RASL12Q9NYN1 266 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 TNFSF18Q9UNG2 199 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 VSIG4Q9Y279 399 aa14.64□□□□□ -0.07
CLCNKA-203ENST00000439316 SEC16AO15027 2179 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 FREM3P0C091 2139 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 KIF26BQ2KJY2 2108 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 OR14I1A6ND48 311 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 WIPF3A6NGB9 483 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 TMEM200CA6NKL6 621 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 OR6C76A6NM76 312 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 PATE3B3GLJ2 98 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms