RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 TSPAN7P41732 249 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 XKR7Q5GH72 579 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 OR2B11Q5JQS5 317 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 TMEM81Q6P7N7 255 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 DPPA2Q7Z7J5 298 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 OR2AK2Q8NG84 335 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 GDF2Q9UK05 429 aaPredicted RBP10.92□□□□□ -0.66
NEK1-201ENST00000439128 PPP1R3CQ9UQK1 317 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 AMDHD2Q9Y303 409 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 RREB1Q92766 1687 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 TCRBV3S1A0A5B6 114 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 NAP1L6A6NFF2 107 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 MED6O75586 246 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 PMP2P02689 132 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 GPM6AP51674 278 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 SMN1Q16637 294 aaKnown RBP10.92□□□□□ -0.66
NEK1-201ENST00000439128 KIRREL2Q6UWL6 708 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 SMIM15Q7Z3B0 74 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 MAELQ96JY0 434 aaKnown RBP10.92□□□□□ -0.66
NEK1-201ENST00000439128 ZNF251Q9BRH9 671 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 LPAR2Q9HBW0 351 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 PRR33A8MZF0 331 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 F5H5P2 479 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 ADH4P08319 380 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 CSF3P09919 207 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 SPI1P17947 270 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 COX7A1P24310 79 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 CLVS2Q5SYC1 327 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 NOXA1Q86UR1 476 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 TM4SF19Q96DZ7 209 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 GINS3Q9BRX5 216 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 PBDC1Q9BVG4 233 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 GLRX2Q9NS18 164 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 PRSS44E7EML9 344 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 SOD1P00441 154 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 GP1BAP07359 652 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 RPS25P62851 125 aaKnown RBP10.91□□□□□ -0.66
NEK1-201ENST00000439128 TGIF1Q15583 401 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 OR51H1Q8NH63 302 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 NMNAT2Q9BZQ4 307 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 ZMAT3Q9HA38 289 aaKnown RBP10.91□□□□□ -0.66
NEK1-201ENST00000439128 ERRFI1Q9UJM3 462 aaPredicted RBP10.91□□□□□ -0.66
NEK1-201ENST00000439128 SMCHD1A6NHR9 2005 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 MRPS14O60783 128 aaKnown RBP10.91□□□□□ -0.66
NEK1-201ENST00000439128 PHLDA2Q53GA4 152 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 OR2T2Q6IF00 324 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 FYTTD1Q96QD9 318 aaKnown RBP10.91□□□□□ -0.66
NEK1-201ENST00000439128 SLC23A1Q9UHI7 598 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 KIR2DS1A0A191URI9 304 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 PRR19A6NJB7 356 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 C17orf112F2Z3M2 114 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 SLC16A6O15403 523 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 PEX11BO96011 259 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 ACTL6AO96019 429 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 RPS27P42677 84 aaKnown RBP10.91□□□□□ -0.66
NEK1-201ENST00000439128 KIR2DS4P43632 304 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 DBPQ10586 325 aaPredicted RBP10.91□□□□□ -0.66
NEK1-201ENST00000439128 KIR2DS1Q14954 304 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 OR1M1Q8NGA1 313 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 HPSE2Q8WWQ2 592 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 RASL10BQ96S79 203 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 PLEKHF2Q9H8W4 249 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 ACOXLQ9NUZ1 547 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 TAS2R3Q9NYW6 316 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 RAB22AQ9UL26 194 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 LYRM1O43325 122 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 ZNF254O75437 659 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 TFAP2EQ6VUC0 442 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 ZNF547Q8IVP9 402 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 OR1F12Q8NHA8 337 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 PINX1Q96BK5 328 aaKnown RBP10.91□□□□□ -0.66
NEK1-201ENST00000439128 KTI12Q96EK9 354 aaPredicted RBP10.91□□□□□ -0.66
NEK1-201ENST00000439128 ZC3H10Q96K80 434 aaKnown RBP10.91□□□□□ -0.66
NEK1-201ENST00000439128 FBXO8Q9NRD0 319 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 MAB21L2Q9Y586 359 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 NOTOA8MTQ0 251 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 LIFP15018 202 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 RPS2P15880 293 aaKnown RBP10.91□□□□□ -0.66
NEK1-201ENST00000439128 MFGE8Q08431 387 aaPredicted RBP10.91□□□□□ -0.66
NEK1-201ENST00000439128 C1orf185Q5T7R7 199 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 ZNF793Q6ZN11 406 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 BHLHA9Q7RTU4 235 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 ADGRE4PQ86SQ3 457 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 FAM3DQ96BQ1 224 aa10.91□□□□□ -0.66
NEK1-201ENST00000439128 SLC23A3Q6PIS1 610 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 CATSPERDQ86XM0 798 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 GPR78Q96P69 363 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 PBOV1Q9GZY1 135 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 HLA-AP01891 365 aaKnown RBP10.9□□□□□ -0.66
NEK1-201ENST00000439128 SP1P08047 785 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 OMGP23515 440 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 SHC1P29353 583 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 GABRA4P48169 554 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 ATPAF1Q5TC12 328 aaPredicted RBP10.9□□□□□ -0.66
NEK1-201ENST00000439128 LGALS14Q8TCE9 139 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 ISL2Q96A47 359 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 ASB4Q9Y574 426 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 KCNE1BA0A087WTH5 132 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 C16orf97H3BN30 126 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 MSTNO14793 375 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms