RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 DHRS7Q9Y394 339 aa1.6□□□□□ -2.15
HMGB1P18-201ENST00000438801 IGKV2D-24A0A075B6R9 120 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 SMIM28A0A1B0GU29 152 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 A0A1B0GVL5 298 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 MACROD2A1Z1Q3 448 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ARHGEF35A5YM69 484 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 EI24O14681 340 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 BCKDKO14874 412 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 MAPK13O15264 365 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 POLR2DO15514 142 aaKnown RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 CLOCKO15516 846 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 COCHO43405 550 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 TRAF3IP2O43734 574 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 CYTH3O43739 400 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 LANCL1O43813 399 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 SCGB2A1O75556 95 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 TOM1L1O75674 476 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 SMC2O95347 1197 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 FGF1P05230 155 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 IVLP07476 585 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ANXA8P13928 327 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 FUT1P19526 365 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 CPN2P22792 545 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 CYP2F1P24903 491 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 MSNP26038 577 aaKnown RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 GNA11P29992 359 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 LONP1P36776 959 aaKnown RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 RFC3P40938 356 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 PPP1R2P41236 205 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 SYKP43405 635 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ACTR3P61158 418 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 RPL23AP62750 156 aaKnown RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 HERVK_113P63132 956 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ERVK-8P63133 956 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 RPS21P63220 83 aaKnown RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 SMARCB1Q12824 385 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 MAB21L1Q13394 359 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ELAVL3Q14576 367 aaKnown RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ARHGAP19Q14CB8 494 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 MPPED2Q15777 294 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 CAMK4Q16566 473 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 PDK4Q16654 411 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 HKDC1Q2TB90 917 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 GLYR1Q49A26 553 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ACSF3Q4G176 576 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 CMPK2Q5EBM0 449 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 FBXO48Q5FWF7 155 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ANXA8L1Q5VT79 327 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ATRAIDQ6UW56 229 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 FAM159AQ6UWV7 190 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 MOB1BQ7L9L4 216 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 APTXQ7Z2E3 356 aaKnown RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 LRRC70Q7Z2Q7 622 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF550Q7Z398 422 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 GOLGA7Q7Z5G4 137 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 SPATA12Q7Z6I5 190 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 MTERF4Q7Z6M4 381 aaKnown RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 LUZP1Q86V48 1076 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 SPATA24Q86W54 205 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 SERPINA9Q86WD7 417 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 C17orf82Q86X59 251 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZDHHC21Q8IVQ6 265 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 LRRC8AQ8IWT6 810 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 BLIDQ8IZY5 108 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 CENPLQ8N0S6 344 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 SPERTQ8NA61 448 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 CCNYQ8ND76 341 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 NEK11Q8NG66 645 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 OR2Y1Q8NGV0 311 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 CCL4L1Q8NHW4 92 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 AGR3Q8TD06 166 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 DDI1Q8WTU0 396 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 CCDC12Q8WUD4 166 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 TMEM37Q8WXS4 190 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 MARC2Q969Z3 335 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 RASD2Q96D21 266 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 SLC25A38Q96DW6 304 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 PDXPQ96GD0 296 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 DHTKD1Q96HY7 919 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 CXorf58Q96LI9 332 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF560Q96MR9 790 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 PSKH2Q96QS6 385 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 GAL3ST1Q99999 423 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 FAM173AQ9BQD7 235 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 CBWD1Q9BRT8 395 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ERVK-6Q9BXR3 956 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 MRPL13Q9BYD1 178 aaKnown RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 PKIBQ9C010 78 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 SLC7A5P2Q9GIP4 190 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 COG4Q9H9E3 785 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 NANOGQ9H9S0 305 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 SLC25A19Q9HC21 320 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF160Q9HCG1 818 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 LINC00846Q9NV44 126 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 GALPQ9UBC7 116 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 COPS7AQ9UBW8 275 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 PURGQ9UJV8 347 aaKnown RBP1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 EMCNQ9ULC0 261 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 ERVW-1Q9UQF0 538 aa1.59□□□□□ -2.15
HMGB1P18-201ENST00000438801 MFHAS1Q9Y4C4 1052 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms