RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 OTX1P32242 354 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-208ENST00000438518 OPRL1P41146 370 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 RGS6P49758 472 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 GABARAPL2P60520 117 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 SLC35A2P78381 396 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 KRTAP27-1Q3LI81 207 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 RNLSQ5VYX0 342 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 ALKBH2Q6NS38 261 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 TMEM154Q6P9G4 183 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 AHSA2Q719I0 299 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-208ENST00000438518 OR10S1Q8NGN2 331 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 PLPPR2Q96GM1 343 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 MS4A3Q96HJ5 214 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 C1QTNF6Q9BXI9 259 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 DUSP21Q9H596 190 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 SP140LQ9H930 580 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 CENPMQ9NSP4 180 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 UBAP1Q9NZ09 502 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 COPS3Q9UNS2 423 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 SPEF1Q9Y4P9 236 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 DPRXA6NFQ7 191 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 DEFB108AA8MXU0 73 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 APOL3O95236 402 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 KRT8P05787 483 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 CD3EP07766 207 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 CELA3BP08861 270 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 TACSTD2P09758 323 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 ZNF35P13682 527 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 TUBG1P23258 451 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 RIDAP52758 137 aaKnown RBP15.95■□□□□ 0.14
HDAC6-208ENST00000438518 TPTEP56180 551 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 GALK2Q01415 458 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 BSPH1Q075Z2 132 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 ST3GAL4Q11206 333 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 MRPL28Q13084 256 aaKnown RBP15.95■□□□□ 0.14
HDAC6-208ENST00000438518 GALEQ14376 348 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 DRAM2Q6UX65 266 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 FAM220AQ7Z4H9 259 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 SYS1Q8N2H4 156 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 SNX33Q8WV41 574 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 COG8Q96MW5 612 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 AMELYQ99218 206 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 ELOVL3Q9HB03 270 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 TUBG2Q9NRH3 451 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 ERVK13-1Q9NX77 482 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 EIF3KQ9UBQ5 218 aaKnown RBP15.95■□□□□ 0.14
HDAC6-208ENST00000438518 PLEKHB1Q9UF11 243 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-208ENST00000438518 MYRFQ9Y2G1 1151 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 KLHDC2Q9Y2U9 406 aa15.95■□□□□ 0.14
HDAC6-208ENST00000438518 HELZ2Q9BYK8 2649 aaKnown RBP15.94■□□□□ 0.14
HDAC6-208ENST00000438518 IGHV2OR16-5A0A0B4J2B6 119 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 C5orf49A4QMS7 147 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 A6NNC1 897 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 M0R135 149 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 ABCD4O14678 606 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 CDK1P06493 297 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 HCCSP53701 268 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 ZNF85Q03923 595 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 CDONQ4KMG0 1287 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 MYPOPQ86VE0 399 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-208ENST00000438518 ZNF799Q96GE5 643 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 TBX5Q99593 518 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 TMEM204Q9BSN7 226 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 TBCCD1Q9NVR7 557 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 IKZF2Q9UKS7 526 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 RNF115Q9Y4L5 304 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 LRP12Q9Y561 859 aa15.94■□□□□ 0.14
HDAC6-208ENST00000438518 LOC100509620A0A075B734 347 aa15.93■□□□□ 0.14
HDAC6-208ENST00000438518 METTL15A6NJ78 407 aa15.93■□□□□ 0.14
HDAC6-208ENST00000438518 ACOD1A6NK06 481 aa15.93■□□□□ 0.14
HDAC6-208ENST00000438518 RAD52P43351 418 aa15.93■□□□□ 0.14
HDAC6-208ENST00000438518 RPS23P62266 143 aaKnown RBP15.93■□□□□ 0.14
HDAC6-208ENST00000438518 LRRN1Q6UXK5 716 aa15.93■□□□□ 0.14
HDAC6-208ENST00000438518 PIAS4Q8N2W9 510 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-208ENST00000438518 NUP37Q8NFH4 326 aa15.93■□□□□ 0.14
HDAC6-208ENST00000438518 SMAP2Q8WU79 429 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-208ENST00000438518 C14orf79Q96F83 325 aa15.93■□□□□ 0.14
HDAC6-208ENST00000438518 DOK1Q99704 481 aa15.93■□□□□ 0.14
HDAC6-208ENST00000438518 ALG8Q9BVK2 526 aa15.93■□□□□ 0.14
HDAC6-208ENST00000438518 CDCA4Q9BXL8 241 aa15.93■□□□□ 0.14
HDAC6-208ENST00000438518 BCL2L14Q9BZR8 327 aa15.93■□□□□ 0.14
HDAC6-208ENST00000438518 MOB1AQ9H8S9 216 aa15.93■□□□□ 0.14
HDAC6-208ENST00000438518 CAB39Q9Y376 341 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-208ENST00000438518 ANKHD1Q8IWZ3 2542 aaKnown RBP15.93■□□□□ 0.14
HDAC6-208ENST00000438518 TMEM129A0AVI4 362 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 FAM221AA4D161 298 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 PTGES3LE9PB15 166 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 F5H5K5 113 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 RGS10O43665 173 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 ABHD16AO95870 558 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 ACSM4P0C7M7 580 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 CCNOP22674 350 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 PSMA6P60900 246 aaKnown RBP15.92■□□□□ 0.14
HDAC6-208ENST00000438518 ZNF829Q3KNS6 432 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-208ENST00000438518 KCTD21Q4G0X4 260 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 ZNF684Q5T5D7 378 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 TMPRSS11AQ6ZMR5 421 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 SSX6Q7RTT6 188 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 PRSS48Q7RTY5 328 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms