RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 IGKV1D-43A0A0B4J1Z2 117 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 MEIOCA2RUB1 952 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 LRRC30A6NM36 301 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 MLNRO43193 412 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 ZFPL1O95159 310 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 FGF4P08620 206 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 NAT1P18440 290 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 GSTM3P21266 225 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 SAA4P35542 130 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 ZNF84P51523 738 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 DCTN2Q13561 401 aaKnown RBP9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 SGCAQ16586 387 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 HIST3H3Q16695 136 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 ZNF181Q2M3W8 571 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 CDONQ4KMG0 1287 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 ALG10BQ5I7T1 473 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 ARL9Q6T311 187 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 COMTD1Q86VU5 262 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 OR5J2Q8NH18 312 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 OR6S1Q8NH40 331 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 NPRL2Q8WTW4 380 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 HAVCR1Q96D42 359 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 DDOQ99489 341 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 OR2H1Q9GZK4 316 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 KCNN2Q9H2S1 579 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 MEAF6Q9HAF1 191 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 C20orf141Q9NUB4 165 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 TAS2R5Q9NYW4 299 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 DCDC2Q9UHG0 476 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 UGT2A1Q9Y4X1 527 aa9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 LSM4Q9Y4Z0 139 aaKnown RBP9.98□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 A0A1B0GVI7 797 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 A0A1W2PPM1 405 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 ADAM20O43506 726 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 PLIN3O60664 434 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 SLC2A10O95528 541 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 DUS4LO95620 317 aaKnown RBP9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 BCHEP06276 602 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 CPA3P15088 417 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 CDKN2CP42773 168 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 SRP9P49458 86 aaKnown RBP9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 CLRN1P58418 232 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 IGFN1Q86VF2 1251 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 C10orf107Q8IVU9 208 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 C1orf87Q8N0U7 546 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 C10orf111Q8N326 155 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 Q8NFD4 153 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 NSMAFQ92636 917 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 MAELQ96JY0 434 aaKnown RBP9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 PSMC3IPQ9P2W1 217 aaPredicted RBP9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 ONECUT1Q9UBC0 465 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 TBK1Q9UHD2 729 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 KPTNQ9Y664 436 aa9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 PLECQ15149 4684 aaKnown RBP9.97□□□□□ -0.81
SMAD9-IT1-201ENST00000437983 ELOVL7A1L3X0 281 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 CCDC154A6NI56 674 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 ABHD16AO95870 558 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 EEF1B2P24534 225 aaKnown RBP9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 MRPS34P82930 218 aaKnown RBP9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 CD83Q01151 205 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 SPANXN4Q5MJ08 99 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 CLEC12AQ5QGZ9 265 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 CEP85LQ5SZL2 805 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 ANXA8L1Q5VT79 327 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 OR2T2Q6IF00 324 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 METAP1DQ6UB28 335 aaPredicted RBP9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 NUDCD3Q8IVD9 361 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 Q8N7P7 452 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 LSMEM1Q8N8F7 131 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 BEND2Q8NDZ0 799 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 SLC7A13Q8TCU3 470 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 MZB1Q8WU39 189 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 SLC38A5Q8WUX1 472 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 ZBTB9Q96C00 473 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 TUBGCP3Q96CW5 907 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 EPYCQ99645 322 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 DCTN5Q9BTE1 182 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 MRPL13Q9BYD1 178 aaKnown RBP9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 NPFFR1Q9GZQ6 430 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 IFT22Q9H7X7 185 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 U3KQE9 123 aa9.96□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 DVL1O14640 695 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 HDAC3O15379 428 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 RNF13O43567 381 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 FAM20BO75063 409 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 OR6A2O95222 327 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 IGHG1P01857 330 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 HLA-DPB1P04440 258 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 ETFAP13804 333 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 HTR5AP47898 357 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 BMXP51813 675 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 MVDP53602 400 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 IFFO1Q0D2I5 559 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 TCTEX1D4Q5JR98 221 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 RANBP3LQ86VV4 465 aaPredicted RBP9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 Q8N2B8 174 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 MREGQ8N565 214 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 BOLLQ8N9W6 283 aaKnown RBP9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 CCDC63Q8NA47 563 aa9.95□□□□□ -0.82
SMAD9-IT1-201ENST00000437983 NPEPL1Q8NDH3 523 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms