RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 OR5D14Q8NGL3 314 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 OR8S1Q8NH09 359 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 POC1BQ8TC44 478 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 NAT6Q93015 286 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 HLA-CQ95604 372 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 FGGYQ96C11 551 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 OXGR1Q96P68 337 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 NPAS1Q99742 590 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 MRPL13Q9BYD1 178 aaKnown RBP9.29□□□□□ -0.92
CD44-210ENST00000434472 DEFB126Q9BYW3 111 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 KCNK15Q9H427 330 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 PTGES2Q9H7Z7 377 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 OPN4Q9UHM6 478 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 CYB5R1Q9UHQ9 305 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 NXT1Q9UKK6 140 aaKnown RBP9.29□□□□□ -0.92
CD44-210ENST00000434472 HDGFL3Q9Y3E1 203 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 B3GALT1Q9Y5Z6 326 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 CEP192Q8TEP8 1941 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 TP53BP1Q12888 1972 aaPredicted RBP9.28□□□□□ -0.92
CD44-210ENST00000434472 SPAG17Q6Q759 2223 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 A0A087WZY1 265 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 IGKV1D-43A0A0B4J1Z2 117 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 LOC102725191A0A1B0GVB3 256 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 A0A1W2PPL8 197 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 MEIS3P1A6NDR6 274 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 ZNF878C9JN71 531 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 H3BML4 177 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 EIF1AYO14602 144 aaKnown RBP9.28□□□□□ -0.92
CD44-210ENST00000434472 YKT6O15498 198 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 TLX3O43711 291 aaPredicted RBP9.28□□□□□ -0.92
CD44-210ENST00000434472 EFNA2O43921 213 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 RP2O75695 350 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 CRYZL1O95825 349 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 TTRP02766 147 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 PDGFAP04085 211 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 AMY2AP04746 511 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 ZNF35P13682 527 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 ZNF20P17024 532 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 RAB3AP20336 220 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 S100A11P31949 105 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 GNALP38405 381 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 CAMK2BQ13554 666 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 TAF13Q15543 124 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 B3GNTL1Q67FW5 361 aaPredicted RBP9.28□□□□□ -0.92
CD44-210ENST00000434472 LPCAT3Q6P1A2 487 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 SLC25A47Q6Q0C1 308 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 ZNF813Q6ZN06 617 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 IDO2Q6ZQW0 420 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 NAXDQ8IW45 347 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 MUC20Q8N307 709 aaPredicted RBP9.28□□□□□ -0.92
CD44-210ENST00000434472 BPIFB2Q8N4F0 458 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 OR4K17Q8NGC6 315 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 OR51A2Q8NGJ7 313 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 OR6X1Q8NH79 312 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 AQP3Q92482 292 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 DVL3Q92997 716 aaPredicted RBP9.28□□□□□ -0.92
CD44-210ENST00000434472 CCDC74BQ96LY2 380 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 SFXN2Q96NB2 322 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 SPSB2Q99619 263 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 PRRT1Q99946 306 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 EDEM2Q9BV94 578 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 POFUT1Q9H488 388 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 SLC2A8Q9NY64 477 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 B3GAT1Q9P2W7 334 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 GPN3Q9UHW5 284 aaPredicted RBP9.28□□□□□ -0.92
CD44-210ENST00000434472 SLC5A6Q9Y289 635 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 POLR1DQ9Y2S0 133 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 KNL1Q8NG31 2342 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 CEP290O15078 2479 aa9.28□□□□□ -0.92
CD44-210ENST00000434472 CCDC163A0A0D9SF12 145 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 A0A1W2PQM1 296 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 B3GALNT1O75752 331 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 TIAF1O95411 115 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 CHRM2P08172 466 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 OR4E1P0C645 316 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 PGA4P0DJD7 388 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 PGA3P0DJD8 388 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 RRASP10301 218 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 TBPP20226 339 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 DHPSP49366 369 aaPredicted RBP9.27□□□□□ -0.92
CD44-210ENST00000434472 CLDN6P56747 220 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 FOXL2P58012 376 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 SLC35A1P78382 337 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 FGL1Q08830 312 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 EIF3IQ13347 325 aaKnown RBP9.27□□□□□ -0.92
CD44-210ENST00000434472 ZNF260Q3ZCT1 412 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 TOR2AQ5JU69 321 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 C11orf88Q6PI97 169 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 CORO6Q6QEF8 472 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 TMUB2Q71RG4 321 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 PGAP1Q75T13 922 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 CHMP1BQ7LBR1 199 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 OR2W3Q7Z3T1 314 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 FADS6Q8N9I5 356 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 DTWD2Q8NBA8 298 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 OR4D6Q8NGJ1 314 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 OR5M1Q8NGP8 315 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 RELTQ969Z4 430 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 ZBTB8AQ96BR9 441 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 SPACA9Q96E40 222 aaPredicted RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms