RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 RFX4Q33E94 735 aa16.94■□□□□ 0.3
HLA-B-250ENST00000434333 FBXW12Q6X9E4 464 aa16.94■□□□□ 0.3
HLA-B-250ENST00000434333 OR6V1Q8N148 313 aa16.94■□□□□ 0.3
HLA-B-250ENST00000434333 FANK1Q8TC84 345 aa16.94■□□□□ 0.3
HLA-B-250ENST00000434333 ERMAPQ96PL5 475 aaPredicted RBP16.94■□□□□ 0.3
HLA-B-250ENST00000434333 OR2V2Q96R30 315 aa16.94■□□□□ 0.3
HLA-B-250ENST00000434333 C7orf69Q9H7B7 122 aa16.94■□□□□ 0.3
HLA-B-250ENST00000434333 PTTG3PQ9NZH4 202 aa16.94■□□□□ 0.3
HLA-B-250ENST00000434333 CD300AQ9UGN4 299 aa16.94■□□□□ 0.3
HLA-B-250ENST00000434333 B9D1Q9UPM9 204 aa16.94■□□□□ 0.3
HLA-B-250ENST00000434333 NBEAL1Q6ZS30 2694 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 ARPC3O15145 178 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 GADD45GO95257 159 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 TNFSF4P23510 183 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 FPR3P25089 353 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 CRABP1P29762 137 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 RGS6P49758 472 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 SEC61A1P61619 476 aaKnown RBP16.93■□□□□ 0.3
HLA-B-250ENST00000434333 SPIBQ01892 262 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 COX10Q12887 443 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 KRT72Q14CN4 511 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 ZMYND11Q15326 602 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 TMEM155Q4W5P6 130 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 LEG1Q6P5S2 330 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 PGM2L1Q6PCE3 622 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 CORO6Q6QEF8 472 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 LRRC28Q86X40 367 aaPredicted RBP16.93■□□□□ 0.3
HLA-B-250ENST00000434333 OR5AS1Q8N127 324 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 DEFB108BQ8NET1 73 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 GJC3Q8NFK1 279 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 SLC26A10Q8NG04 563 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 NANPQ8TBE9 248 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 ST7LQ8TDW4 575 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 NMNAT3Q96T66 252 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 COQ7Q99807 217 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 FAM107BQ9H098 131 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 HDHD2Q9H0R4 259 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 PATZ1Q9HBE1 687 aaKnown RBP16.93■□□□□ 0.3
HLA-B-250ENST00000434333 MMP26Q9NRE1 261 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 MAGEL2Q9UJ55 1249 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 POLR1DQ9Y2S0 133 aa16.93■□□□□ 0.3
HLA-B-250ENST00000434333 POLR3KQ9Y2Y1 108 aaPredicted RBP16.93■□□□□ 0.3
HLA-B-250ENST00000434333 F5H0A9 414 aaPredicted RBP16.92■□□□□ 0.3
HLA-B-250ENST00000434333 FOXH1O75593 365 aa16.92■□□□□ 0.3
HLA-B-250ENST00000434333 HIST1H1CP16403 213 aaKnown RBP16.92■□□□□ 0.3
HLA-B-250ENST00000434333 MSX2P35548 267 aaPredicted RBP16.92■□□□□ 0.3
HLA-B-250ENST00000434333 BTG1P62324 171 aa16.92■□□□□ 0.3
HLA-B-250ENST00000434333 KRTAP27-1Q3LI81 207 aa16.92■□□□□ 0.3
HLA-B-250ENST00000434333 OR2T2Q6IF00 324 aa16.92■□□□□ 0.3
HLA-B-250ENST00000434333 DNM1P34Q6PK57 102 aa16.92■□□□□ 0.3
HLA-B-250ENST00000434333 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.92■□□□□ 0.3
HLA-B-250ENST00000434333 PGAM4Q8N0Y7 254 aa16.92■□□□□ 0.3
HLA-B-250ENST00000434333 SLC6A7Q99884 636 aa16.92■□□□□ 0.3
HLA-B-250ENST00000434333 SRA1Q9HD15 236 aaKnown RBP16.92■□□□□ 0.3
HLA-B-250ENST00000434333 PPP1R3CQ9UQK1 317 aa16.92■□□□□ 0.3
HLA-B-250ENST00000434333 A8MXK9 166 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 TRAPPC2LH3BP13 241 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 TMEM178BH3BS89 294 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 ARPC2O15144 300 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 GMNNO75496 209 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 SLC6A6P31641 620 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 SLC6A9P48067 706 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 GSSP48637 474 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 CENPAP49450 140 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 MMP16P51512 607 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 SMIM11AP58511 58 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 TUSC1Q2TAM9 212 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 C12orf54Q6X4T0 127 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 CFAP77Q6ZQR2 320 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 COLCA1Q6ZS62 124 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 ZBTB46Q86UZ6 589 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 SPICQ8N5J4 248 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 OR8G5Q8NG78 346 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 OR10AD1Q8NGE0 317 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 OR4K13Q8NH42 304 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 FAM216AQ8WUB2 273 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 DVL3Q92997 716 aaPredicted RBP16.91■□□□□ 0.3
HLA-B-250ENST00000434333 APOBEC3DQ96AK3 386 aaPredicted RBP16.91■□□□□ 0.3
HLA-B-250ENST00000434333 GCM1Q9NP62 436 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 ESM1Q9NQ30 184 aa16.91■□□□□ 0.3
HLA-B-250ENST00000434333 H0YL77 283 aa16.9■□□□□ 0.3
HLA-B-250ENST00000434333 SURF4O15260 269 aa16.9■□□□□ 0.3
HLA-B-250ENST00000434333 MLNRO43193 412 aa16.9■□□□□ 0.3
HLA-B-250ENST00000434333 ATP8B1O43520 1251 aa16.9■□□□□ 0.3
HLA-B-250ENST00000434333 OR10H3O60404 316 aa16.9■□□□□ 0.3
HLA-B-250ENST00000434333 CFPP27918 469 aa16.9■□□□□ 0.3
HLA-B-250ENST00000434333 RRM2P31350 389 aa16.9■□□□□ 0.3
HLA-B-250ENST00000434333 COMPP49747 757 aaPredicted RBP16.9■□□□□ 0.3
HLA-B-250ENST00000434333 SLC18B1Q6NT16 456 aa16.9■□□□□ 0.3
HLA-B-250ENST00000434333 JAZF1Q86VZ6 243 aa16.9■□□□□ 0.3
HLA-B-250ENST00000434333 KLHL36Q8N4N3 616 aa16.9■□□□□ 0.3
HLA-B-250ENST00000434333 OR5L1Q8NGL2 311 aa16.9■□□□□ 0.3
HLA-B-250ENST00000434333 MEGF10Q96KG7 1140 aa16.9■□□□□ 0.3
HLA-B-250ENST00000434333 NSMCE2Q96MF7 247 aa16.9■□□□□ 0.3
HLA-B-250ENST00000434333 FN3KQ9H479 309 aa16.9■□□□□ 0.3
HLA-B-250ENST00000434333 PNRC2Q9NPJ4 139 aaKnown RBP16.9■□□□□ 0.3
HLA-B-250ENST00000434333 RPRD1BQ9NQG5 326 aaKnown RBP16.9■□□□□ 0.3
HLA-B-250ENST00000434333 A0A1B0GWJ7 208 aa16.89■□□□□ 0.29
HLA-B-250ENST00000434333 TMEM89A2RUT3 159 aa16.89■□□□□ 0.29
HLA-B-250ENST00000434333 OR6C68A6NDL8 312 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms