RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 A0A1B0GV90 55 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 NME2P1O60361 137 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 AGAP20933 346 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 GPX4P36969 197 aaPredicted RBP10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 ARRB1P49407 418 aaPredicted RBP10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 CEBPGP53567 150 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 CYCSP99999 105 aaKnown RBP10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 NAAAQ02083 359 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 BIKQ13323 160 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 ZNF77Q15935 545 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 PDZD11Q5EBL8 140 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 CDPF1Q6NVV7 123 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 LILRB2Q8N423 598 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 ZNF565Q8N9K5 539 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 OR4D6Q8NGJ1 314 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 OR13C9Q8NGT0 318 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 ASB5Q8WWX0 329 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 S100PBPQ96BU1 408 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 LPAR4Q99677 370 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 MYOZ1Q9NP98 299 aaPredicted RBP10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 DEC1Q9P2X7 70 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 URADA6NGE7 173 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 H7C1Q1 480 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 EML2O95834 649 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 TSPAN15O95858 294 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 ITGA3P26006 1051 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 RPS10P46783 165 aaKnown RBP10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 NDUFA6P56556 154 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 DMWDQ09019 674 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 EIF5AL1Q6IS14 154 aaKnown RBP10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 LCN10Q6JVE6 187 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 ADAMTS17Q8TE56 1095 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 TSPAN32Q96QS1 320 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 PIGQQ9BRB3 760 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 SLC17A9Q9BYT1 436 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 SLC17A5Q9NRA2 495 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 MFNGO00587 321 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 XKRYO14609 159 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 APBB3O95704 486 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 ZNF10P21506 573 aaPredicted RBP10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 DVL1P1P54792 670 aaPredicted RBP10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 DEFB103AP81534 67 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 EGR3Q06889 387 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 ERV3-1Q14264 604 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 SLC17A1Q14916 467 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 GRASPQ7Z6J2 395 aaPredicted RBP10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 ZNF383Q8NA42 475 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 TMPRSS5Q9H3S3 457 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 EMC9Q9Y3B6 208 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 KIAA1549LQ6ZVL6 1849 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 SLC31A1O15431 190 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 SLC16A7O60669 478 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 MOSPD3O75425 235 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 NKX2-2O95096 273 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 IL2RAP01589 272 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 HLA-GP17693 338 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 ADPRHP54922 357 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 ACTR1AP61163 376 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 COL19A1Q14993 1142 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 TMEM244Q5VVB8 128 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 DRAM2Q6UX65 266 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 OR4K15Q8NH41 348 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 ST7LQ8TDW4 575 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 RNF128Q8TEB7 428 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 RERGQ96A58 199 aaPredicted RBP10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 RAB3CQ96E17 227 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 KTI12Q96EK9 354 aaPredicted RBP10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 TMEM41AQ96HV5 264 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.37□□□□□ -0.752e-7■■■■■ 30.7
HMGCS1-202ENST00000433297 COLEC10Q9Y6Z7 277 aa10.37□□□□□ -0.75
HMGCS1-202ENST00000433297 CDH23Q9H251 3354 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 IGKV1D-42A0A075B6H8 117 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 OTOL1A6NHN0 477 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 ZNF729A6NN14 1252 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 FCGR3AP08637 254 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 S100A2P29034 98 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 SLC25A1P53007 311 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 HGFACQ04756 655 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 SGCGQ13326 291 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 ZNF74Q16587 644 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 COX15Q7KZN9 410 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 SSX9Q7RTT3 188 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 ZDHHC22Q8N966 263 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 OR2I1PQ8NGU4 316 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 OTOSQ8NHW6 89 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 MAFIPQ8WZ33 124 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 SAT2Q96F10 170 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 SMIM8Q96KF7 97 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 OR10C1Q96KK4 312 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 OR2A5Q96R48 311 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 KPTNQ9Y664 436 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 HEATR5AQ86XA9 2040 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 MPDZO75970 2070 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 A0A1W2PP55 124 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 IFNA2P01563 188 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 ADH1AP07327 375 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 OR13C7P0DN81 318 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 KIAA0141Q14154 515 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 OR2A2Q6IF42 318 aa10.36□□□□□ -0.75
HMGCS1-202ENST00000433297 CBLN3Q6UW01 205 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms