RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 SLC7A6Q92536 515 aa12.81□□□□□ -0.36
HERC3-206ENST00000431413 APOBEC3DQ96AK3 386 aaPredicted RBP12.81□□□□□ -0.36
HERC3-206ENST00000431413 DHRS1Q96LJ7 313 aa12.81□□□□□ -0.36
HERC3-206ENST00000431413 ZNF582Q96NG8 517 aaPredicted RBP12.81□□□□□ -0.36
HERC3-206ENST00000431413 TMCC3Q9ULS5 477 aa12.81□□□□□ -0.36
HERC3-206ENST00000431413 ARPC3O15145 178 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 OR10H3O60404 316 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 RGS9O75916 674 aaPredicted RBP12.8□□□□□ -0.36
HERC3-206ENST00000431413 PPP1R3DO95685 299 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 IGHV2-70P01814 119 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 FXYD6P3P58550 94 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 BTG1P62324 171 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 SPIBQ01892 262 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 RFX4Q33E94 735 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 SLC36A3Q495N2 470 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 SAMD4BQ5PRF9 694 aaKnown RBP12.8□□□□□ -0.36
HERC3-206ENST00000431413 FBXW12Q6X9E4 464 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 Q6ZR03 302 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 MUC20Q8N307 709 aaPredicted RBP12.8□□□□□ -0.36
HERC3-206ENST00000431413 FAM86B1Q8N7N1 296 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 OR13G1Q8NGZ3 307 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 FAM216AQ8WUB2 273 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 NSMCE2Q96MF7 247 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 OR2V2Q96R30 315 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 COQ7Q99807 217 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 IFT27Q9BW83 186 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 RBM4Q9BWF3 364 aaKnown RBP12.8□□□□□ -0.36
HERC3-206ENST00000431413 CDADC1Q9BWV3 514 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 OR52D1Q9H346 318 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 POFUT1Q9H488 388 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 V9GYQ6 96 aa12.8□□□□□ -0.36
HERC3-206ENST00000431413 IDH3BO43837 385 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 SNX3O60493 162 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 FABP3P05413 133 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 HSD17B1P14061 328 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 SELEP16581 610 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 ADRA2CP18825 462 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 CPT2P23786 658 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 FPR3P25089 353 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 MDH2P40926 338 aaKnown RBP12.79□□□□□ -0.36
HERC3-206ENST00000431413 SRP9P49458 86 aaKnown RBP12.79□□□□□ -0.36
HERC3-206ENST00000431413 HIST1H3AP68431 136 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 ECH1Q13011 328 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 SPRNQ5BIV9 151 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 HIST2H3PS2Q5TEC6 136 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 OTPQ5XKR4 325 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 LEG1Q6P5S2 330 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 RBMS3Q6XE24 437 aaKnown RBP12.79□□□□□ -0.36
HERC3-206ENST00000431413 HIST2H3AQ71DI3 136 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.79□□□□□ -0.36
HERC3-206ENST00000431413 LRRC28Q86X40 367 aaPredicted RBP12.79□□□□□ -0.36
HERC3-206ENST00000431413 PGAM4Q8N0Y7 254 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 OR5AS1Q8N127 324 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 OR8G5Q8NG78 346 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 OR2AJ1Q8NGZ0 328 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 ITLN1Q8WWA0 313 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 GCDHQ92947 438 aaPredicted RBP12.79□□□□□ -0.36
HERC3-206ENST00000431413 TSSK2Q96PF2 358 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 NMNAT3Q96T66 252 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 FUZQ9BT04 418 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 HCAR1Q9BXC0 346 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 PATZ1Q9HBE1 687 aaKnown RBP12.79□□□□□ -0.36
HERC3-206ENST00000431413 SRA1Q9HD15 236 aaKnown RBP12.79□□□□□ -0.36
HERC3-206ENST00000431413 NDE1Q9NXR1 346 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 PTTG3PQ9NZH4 202 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 B9D1Q9UPM9 204 aa12.79□□□□□ -0.36
HERC3-206ENST00000431413 DBHP09172 617 aa12.78□□□□□ -0.36
HERC3-206ENST00000431413 COX10Q12887 443 aa12.78□□□□□ -0.36
HERC3-206ENST00000431413 HLXQ14774 488 aaPredicted RBP12.78□□□□□ -0.36
HERC3-206ENST00000431413 ESCO2Q56NI9 601 aa12.78□□□□□ -0.36
HERC3-206ENST00000431413 OR2T2Q6IF00 324 aa12.78□□□□□ -0.36
HERC3-206ENST00000431413 OR6V1Q8N148 313 aa12.78□□□□□ -0.36
HERC3-206ENST00000431413 OR4K13Q8NH42 304 aa12.78□□□□□ -0.36
HERC3-206ENST00000431413 POP5Q969H6 163 aaKnown RBP12.78□□□□□ -0.36
HERC3-206ENST00000431413 GPA33Q99795 319 aa12.78□□□□□ -0.36
HERC3-206ENST00000431413 NTN4Q9HB63 628 aa12.78□□□□□ -0.36
HERC3-206ENST00000431413 RPRD1BQ9NQG5 326 aaKnown RBP12.78□□□□□ -0.36
HERC3-206ENST00000431413 DCAF16Q9NXF7 216 aa12.78□□□□□ -0.36
HERC3-206ENST00000431413 LHFPL6Q9Y693 200 aa12.78□□□□□ -0.36
HERC3-206ENST00000431413 NBEAL1Q6ZS30 2694 aa12.78□□□□□ -0.36
HERC3-206ENST00000431413 WNK2Q9Y3S1 2297 aa12.77□□□□□ -0.36
HERC3-206ENST00000431413 IGLV1-36A0A0B4J1U3 117 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 LRRC30A6NM36 301 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 TMEM178BH3BS89 294 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 DCTN6O00399 190 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 HLA-DQA2P01906 255 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 SEMG1P04279 462 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 HIST1H1CP16403 213 aaKnown RBP12.77□□□□□ -0.37
HERC3-206ENST00000431413 ZFP36P26651 326 aaKnown RBP12.77□□□□□ -0.37
HERC3-206ENST00000431413 SLC6A9P48067 706 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 MALLQ13021 153 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 ZMYND11Q15326 602 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 MEP1BQ16820 701 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 SPATS1Q496A3 300 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 ARMCX4Q5H9R4 360 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 RPL13AP3Q6NVV1 102 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 C16orf89Q6UX73 402 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 C1orf87Q8N0U7 546 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 SLC26A10Q8NG04 563 aa12.77□□□□□ -0.37
HERC3-206ENST00000431413 OR52L1Q8NGH7 329 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms