RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 GPRIN2O60269 458 aa15.97■□□□□ 0.15
HMGN1-206ENST00000431390 GPX5O75715 221 aa15.97■□□□□ 0.15
HMGN1-206ENST00000431390 GDI2P50395 445 aaKnown RBP15.97■□□□□ 0.15
HMGN1-206ENST00000431390 CCR9P51686 369 aa15.97■□□□□ 0.15
HMGN1-206ENST00000431390 SLC3A1Q07837 685 aa15.97■□□□□ 0.15
HMGN1-206ENST00000431390 SCRN3Q0VDG4 424 aa15.97■□□□□ 0.15
HMGN1-206ENST00000431390 FOXF2Q12947 444 aa15.97■□□□□ 0.15
HMGN1-206ENST00000431390 ZNF544Q6NX49 715 aa15.97■□□□□ 0.15
HMGN1-206ENST00000431390 Q6ZT83 130 aa15.97■□□□□ 0.15
HMGN1-206ENST00000431390 SLC16A14Q7RTX9 510 aa15.97■□□□□ 0.15
HMGN1-206ENST00000431390 ALDH16A1Q8IZ83 802 aa15.97■□□□□ 0.15
HMGN1-206ENST00000431390 MS4A15Q8N5U1 240 aa15.97■□□□□ 0.15
HMGN1-206ENST00000431390 OR2G2Q8NGZ5 317 aa15.97■□□□□ 0.15
HMGN1-206ENST00000431390 LOC100506127A0A0U1RQW1 187 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 TRDV1A0A1B0GX56 115 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 SRSF10O75494 262 aaKnown RBP15.96■□□□□ 0.15
HMGN1-206ENST00000431390 ATE1O95260 518 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 ITGA5P08648 1049 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 COL8A1P27658 744 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 FOXG1P55316 489 aaPredicted RBP15.96■□□□□ 0.15
HMGN1-206ENST00000431390 NANOS3P60323 173 aaKnown RBP15.96■□□□□ 0.15
HMGN1-206ENST00000431390 GRB2P62993 217 aaKnown RBP15.96■□□□□ 0.15
HMGN1-206ENST00000431390 MRPL49Q13405 166 aaKnown RBP15.96■□□□□ 0.15
HMGN1-206ENST00000431390 CCDC92Q53HC0 331 aaPredicted RBP15.96■□□□□ 0.15
HMGN1-206ENST00000431390 ELFN2Q5R3F8 820 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 ZNF787Q6DD87 383 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 SKA3Q8IX90 412 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 RPRMLQ8N4K4 120 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 ST6GALNAC3Q8NDV1 305 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 HSD17B8Q92506 261 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 GHSRQ92847 366 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 TMEM203Q969S6 136 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 TMED9Q9BVK6 235 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 PROCRQ9UNN8 238 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 R4GMQ9 66 aa15.96■□□□□ 0.15
HMGN1-206ENST00000431390 CREBBPQ92793 2442 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 IL18BPO95998 194 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 CGAP01215 116 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 GLI4P10075 376 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 CD8BP10966 210 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 CTSSP25774 331 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 FGF9P31371 208 aaPredicted RBP15.96■□□□□ 0.14
HMGN1-206ENST00000431390 VBP1P61758 197 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 LSM3P62310 102 aaKnown RBP15.96■□□□□ 0.14
HMGN1-206ENST00000431390 RAB35Q15286 201 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 TAF13Q15543 124 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 ZNF829Q3KNS6 432 aaPredicted RBP15.96■□□□□ 0.14
HMGN1-206ENST00000431390 C9orf135Q5VTT2 229 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 ANKRD16Q6P6B7 361 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 BTLAQ7Z6A9 289 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 OR1K1Q8NGR3 316 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 STARD4Q96DR4 205 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 C4orf45Q96LM5 186 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 ATF6BQ99941 703 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 CENPOQ9BU64 300 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 SFXN3Q9BWM7 321 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 HDHD2Q9H0R4 259 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 EXOSC4Q9NPD3 245 aaKnown RBP15.96■□□□□ 0.14
HMGN1-206ENST00000431390 FRRS1LQ9P0K9 344 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 FBXL3Q9UKT7 428 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 TIMM10BQ9Y5J6 103 aa15.96■□□□□ 0.14
HMGN1-206ENST00000431390 TMEM212A6NML5 194 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 LRRTM2O43300 516 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 SGCEO43556 437 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 RGS9O75916 674 aaPredicted RBP15.95■□□□□ 0.14
HMGN1-206ENST00000431390 SERPINA3P01011 423 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 ZNF32P17041 273 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 HSD11B1P28845 292 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 MMP16P51512 607 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 NCS1P62166 190 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 FABP5Q01469 135 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 TGFBR3Q03167 851 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 SLC36A2Q495M3 483 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 DPPA2Q7Z7J5 298 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 NAXEQ8NCW5 288 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 PLEK2Q9NYT0 353 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 SLC5A6Q9Y289 635 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 ZNF281Q9Y2X9 895 aa15.95■□□□□ 0.14
HMGN1-206ENST00000431390 INTS1Q8N201 2190 aaKnown RBP15.94■□□□□ 0.14
HMGN1-206ENST00000431390 OR4C45A6NMZ5 311 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 LOC110117498-PIK3R3F6TDL0 507 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 ZFPL1O95159 310 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 PNPP00491 289 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 MMP7P09237 267 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-206ENST00000431390 IGHV1-2P23083 117 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 UGT2B10P36537 528 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 PSMA6P60900 246 aaKnown RBP15.94■□□□□ 0.14
HMGN1-206ENST00000431390 ECH1Q13011 328 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 YIF1BQ5BJH7 314 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 WDR38Q5JTN6 314 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 C3P1Q6ZMU1 363 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 CATSPERDQ86XM0 798 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 PRSS35Q8N3Z0 413 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 OR5AK2Q8NH90 309 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 TRMT61AQ96FX7 289 aaKnown RBP15.94■□□□□ 0.14
HMGN1-206ENST00000431390 BOD1Q96IK1 185 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 KCNJ15Q99712 375 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 OR2H1Q9GZK4 316 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 COMMD4Q9H0A8 199 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 MOB1AQ9H8S9 216 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms