RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 KCNJ15Q99712 375 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 HDHD2Q9H0R4 259 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 B4GALT7Q9UBV7 327 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 FOXD3Q9UJU5 478 aaPredicted RBP14.74□□□□□ -0.05
USHBP1-203ENST00000431146 ANKRD34BA5PLL1 514 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 ZNF716A6NP11 495 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 SP1P08047 785 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 HSD11B1P28845 292 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 MEOX1P50221 254 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 PLA2G7Q13093 441 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 TAF13Q15543 124 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 UBE2NLQ5JXB2 153 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 MTFR2Q6P444 385 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 TMPRSS7Q7RTY8 843 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 TMEM251Q8N6I4 163 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 PLPP7Q8NBV4 271 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 SLC25A38Q96DW6 304 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 ZFP3Q96NJ6 502 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 AGAP4Q96P64 663 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 ULBP2Q9BZM5 246 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 MMP28Q9H239 520 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 TAS2R4Q9NYW5 299 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 OR5V1Q9UGF6 321 aa14.73□□□□□ -0.05
USHBP1-203ENST00000431146 OR5H15A6NDH6 313 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 ZNF878C9JN71 531 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 EEF1E1O43324 174 aaKnown RBP14.72□□□□□ -0.05
USHBP1-203ENST00000431146 DNPH1O43598 174 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 TTRP02766 147 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 NBL1P41271 181 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 MMP16P51512 607 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 NOVA1P51513 510 aaKnown RBP14.72□□□□□ -0.05
USHBP1-203ENST00000431146 C10orf128Q5T292 105 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 ZNF57Q68EA5 555 aaPredicted RBP14.72□□□□□ -0.05
USHBP1-203ENST00000431146 ASB18Q6ZVZ8 466 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 GLCCI1Q86VQ1 547 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 MDS2Q8NDY4 140 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 SF3B5Q9BWJ5 86 aaKnown RBP14.72□□□□□ -0.05
USHBP1-203ENST00000431146 PBOV1Q9GZY1 135 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.72□□□□□ -0.05
USHBP1-203ENST00000431146 PNRC2Q9NPJ4 139 aaKnown RBP14.72□□□□□ -0.05
USHBP1-203ENST00000431146 DDX28Q9NUL7 540 aaKnown RBP14.72□□□□□ -0.05
USHBP1-203ENST00000431146 HHLA2Q9UM44 414 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 CSAG2Q9Y5P2 127 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 CUL9Q8IWT3 2517 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 TFECO14948 347 aaPredicted RBP14.72□□□□□ -0.05
USHBP1-203ENST00000431146 DHHO43323 396 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 HLA-DQB1P01920 261 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 HPNP05981 417 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 ACSM4P0C7M7 580 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 LIPCP11150 499 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 MSR1P21757 451 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 GUCA1AP43080 201 aaPredicted RBP14.72□□□□□ -0.05
USHBP1-203ENST00000431146 INPP1P49441 399 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 GALK2Q01415 458 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 KCNMB1Q16558 191 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 SLC25A25Q6KCM7 469 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 PRSS45Q7RTY3 260 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 C20orf196Q8IYI0 205 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 OR51A2Q8NGJ7 313 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 NABP1Q96AH0 204 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 THAP7Q9BT49 309 aaPredicted RBP14.72□□□□□ -0.05
USHBP1-203ENST00000431146 NELFAQ9H3P2 528 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 KCNK15Q9H427 330 aa14.72□□□□□ -0.05
USHBP1-203ENST00000431146 FAM186AA6NE01 2351 aa14.71□□□□□ -0.05
USHBP1-203ENST00000431146 FREM1Q5H8C1 2179 aa14.71□□□□□ -0.05
USHBP1-203ENST00000431146 NME2P1O60361 137 aa14.71□□□□□ -0.05
USHBP1-203ENST00000431146 NME2P22392 152 aa14.71□□□□□ -0.05
USHBP1-203ENST00000431146 LHX2P50458 406 aa14.71□□□□□ -0.05
USHBP1-203ENST00000431146 ABLIM2Q6H8Q1 611 aa14.71□□□□□ -0.05
USHBP1-203ENST00000431146 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.71□□□□□ -0.05
USHBP1-203ENST00000431146 GCDHQ92947 438 aaPredicted RBP14.71□□□□□ -0.05
USHBP1-203ENST00000431146 ALKBH3Q96Q83 286 aaPredicted RBP14.71□□□□□ -0.05
USHBP1-203ENST00000431146 SLC22A4Q9H015 551 aa14.71□□□□□ -0.05
USHBP1-203ENST00000431146 DCHS1Q96JQ0 3298 aa14.71□□□□□ -0.05
USHBP1-203ENST00000431146 PTPRZ1P23471 2315 aaPredicted RBP14.71□□□□□ -0.05
USHBP1-203ENST00000431146 ISG15P05161 165 aa14.71□□□□□ -0.06
USHBP1-203ENST00000431146 CD2P06729 351 aa14.71□□□□□ -0.06
USHBP1-203ENST00000431146 ITGA5P08648 1049 aa14.71□□□□□ -0.06
USHBP1-203ENST00000431146 NR2C1P13056 603 aa14.71□□□□□ -0.06
USHBP1-203ENST00000431146 ACHEP22303 614 aa14.71□□□□□ -0.06
USHBP1-203ENST00000431146 ARG2P78540 354 aa14.71□□□□□ -0.06
USHBP1-203ENST00000431146 DGCR2P98153 550 aa14.71□□□□□ -0.06
USHBP1-203ENST00000431146 ENDOGQ14249 297 aaKnown RBP14.71□□□□□ -0.06
USHBP1-203ENST00000431146 C3AR1Q16581 482 aa14.71□□□□□ -0.06
USHBP1-203ENST00000431146 PYHIN1Q6K0P9 492 aa14.71□□□□□ -0.06
USHBP1-203ENST00000431146 ZNF704Q6ZNC4 412 aaPredicted RBP14.71□□□□□ -0.06
USHBP1-203ENST00000431146 LUZP2Q86TE4 346 aa14.71□□□□□ -0.06
USHBP1-203ENST00000431146 SYNPRQ8TBG9 265 aa14.71□□□□□ -0.06
USHBP1-203ENST00000431146 SOX7Q9BT81 388 aa14.71□□□□□ -0.06
USHBP1-203ENST00000431146 ZNF552Q9H707 407 aaPredicted RBP14.71□□□□□ -0.06
USHBP1-203ENST00000431146 SLC5A6Q9Y289 635 aa14.71□□□□□ -0.06
USHBP1-203ENST00000431146 KLF13Q9Y2Y9 288 aaPredicted RBP14.71□□□□□ -0.06
USHBP1-203ENST00000431146 BOD1L1Q8NFC6 3051 aa14.71□□□□□ -0.06
USHBP1-203ENST00000431146 CD3GP09693 182 aa14.7□□□□□ -0.06
USHBP1-203ENST00000431146 UBCP0CG48 685 aaKnown RBP14.7□□□□□ -0.06
USHBP1-203ENST00000431146 TMIGD3P0DMS9 266 aaPredicted RBP14.7□□□□□ -0.06
USHBP1-203ENST00000431146 KIR2DL3P43628 341 aa14.7□□□□□ -0.06
USHBP1-203ENST00000431146 SRP9P49458 86 aaKnown RBP14.7□□□□□ -0.06
USHBP1-203ENST00000431146 CCL11P51671 97 aa14.7□□□□□ -0.06
USHBP1-203ENST00000431146 CLDN18P56856 261 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms