RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 CCNOP22674 350 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 CRHBPP24387 322 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 OPRL1P41146 370 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 SLC6A9P48067 706 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 RGS6P49758 472 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 RIDAP52758 137 aaKnown RBP9.55□□□□□ -0.88
CHD4-202ENST00000430771 TPTEP56180 551 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 PSMA6P60900 246 aaKnown RBP9.55□□□□□ -0.88
CHD4-202ENST00000430771 RPS23P62266 143 aaKnown RBP9.55□□□□□ -0.88
CHD4-202ENST00000430771 ROM1Q03395 351 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 BSPH1Q075Z2 132 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 ZNF829Q3KNS6 432 aaPredicted RBP9.55□□□□□ -0.88
CHD4-202ENST00000430771 NCMAPQ5T1S8 102 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 LAIR2Q6ISS4 152 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 DEGS2Q6QHC5 323 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 PLEKHG7Q6ZR37 379 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 SPATC1Q76KD6 591 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 MYPOPQ86VE0 399 aaPredicted RBP9.55□□□□□ -0.88
CHD4-202ENST00000430771 ZNF679Q8IYX0 411 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 CPEB3Q8NE35 698 aaKnown RBP9.55□□□□□ -0.88
CHD4-202ENST00000430771 OR10S1Q8NGN2 331 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 SNX33Q8WV41 574 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 GGHQ92820 318 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 PIK3IP1Q96FE7 263 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 ZNF799Q96GE5 643 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 PLPPR2Q96GM1 343 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 MS4A3Q96HJ5 214 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 RADILQ96JH8 1075 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 POM121L2Q96KW2 1035 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 DOK1Q99704 481 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 KCNJ15Q99712 375 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 ALG8Q9BVK2 526 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 YTHDF1Q9BYJ9 559 aaKnown RBP9.55□□□□□ -0.88
CHD4-202ENST00000430771 TTTY10Q9BZA0 68 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 FKBP14Q9NWM8 211 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 UBAP1Q9NZ09 502 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 EIF3KQ9UBQ5 218 aaKnown RBP9.55□□□□□ -0.88
CHD4-202ENST00000430771 PLEKHB1Q9UF11 243 aaPredicted RBP9.55□□□□□ -0.88
CHD4-202ENST00000430771 RNF115Q9Y4L5 304 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 SPEF1Q9Y4P9 236 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 LRRC42Q9Y546 428 aa9.55□□□□□ -0.88
CHD4-202ENST00000430771 A6NNC1 897 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 DEFB108AA8MXU0 73 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 F5H5K5 113 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 RGS10O43665 173 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 SULT1C4O75897 302 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 ABHD16AO95870 558 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 CDK1P06493 297 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 EEF1B2P24534 225 aaKnown RBP9.54□□□□□ -0.88
CHD4-202ENST00000430771 CX3CR1P49238 355 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 SLC35A2P78381 396 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 ZNF85Q03923 595 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 ST3GAL4Q11206 333 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 MRPL28Q13084 256 aaKnown RBP9.54□□□□□ -0.88
CHD4-202ENST00000430771 GALEQ14376 348 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 DAZAP2Q15038 168 aaPredicted RBP9.54□□□□□ -0.88
CHD4-202ENST00000430771 CDONQ4KMG0 1287 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 ZNF544Q6NX49 715 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 SLC22A25Q6T423 547 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 DRAM2Q6UX65 266 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 LRRN1Q6UXK5 716 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 C1orf174Q8IYL3 243 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 SYS1Q8N2H4 156 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 KLHL36Q8N4N3 616 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 RFLNBQ8N5W9 214 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 ZNF283Q8N7M2 679 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 HAVCR2Q8TDQ0 301 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 SMAP2Q8WU79 429 aaPredicted RBP9.54□□□□□ -0.88
CHD4-202ENST00000430771 COG8Q96MW5 612 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 PSMG3-AS1Q96PY0 264 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 AMELYQ99218 206 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 RHNO1Q9BSD3 238 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 MOB1AQ9H8S9 216 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 SP140LQ9H930 580 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 ELOVL3Q9HB03 270 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 ERVK13-1Q9NX77 482 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 POU2F3Q9UKI9 436 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 MYRFQ9Y2G1 1151 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 LRP12Q9Y561 859 aa9.54□□□□□ -0.88
CHD4-202ENST00000430771 DPRXA6NFQ7 191 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 ATP6V1G2-DDX39BF2Z307 99 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 ICMTO60725 284 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 MRPS14O60783 128 aaKnown RBP9.53□□□□□ -0.88
CHD4-202ENST00000430771 TNFAIP8O95379 198 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 TACSTD2P09758 323 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 CCL2P13500 99 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 PCSK6P29122 969 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 OTX1P32242 354 aaPredicted RBP9.53□□□□□ -0.88
CHD4-202ENST00000430771 DCTDP32321 178 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 HCCSP53701 268 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 SPOCK1Q08629 439 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 SNTB2Q13425 540 aaKnown RBP9.53□□□□□ -0.88
CHD4-202ENST00000430771 KRTAP27-1Q3LI81 207 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 KCTD21Q4G0X4 260 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 SP5Q6BEB4 398 aaPredicted RBP9.53□□□□□ -0.88
CHD4-202ENST00000430771 ADAM5Q6NVV9 412 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 TMPRSS11AQ6ZMR5 421 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 SSX6Q7RTT6 188 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 KCTD20Q7Z5Y7 419 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 EGFL6Q8IUX8 553 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms