RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 SPAG4Q9NPE6 437 aa14.38□□□□□ -0.11
CPSF4-203ENST00000430038 MED4Q9NPJ6 270 aa14.38□□□□□ -0.11
CPSF4-203ENST00000430038 CGGBP1Q9UFW8 167 aaPredicted RBP14.38□□□□□ -0.11
CPSF4-203ENST00000430038 FAM32AQ9Y421 112 aaKnown RBP14.38□□□□□ -0.11
CPSF4-203ENST00000430038 MLNRO43193 412 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 SNX3O60493 162 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 HIST1H1CP16403 213 aaKnown RBP14.37□□□□□ -0.11
CPSF4-203ENST00000430038 SELEP16581 610 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 GSTM3P21266 225 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 PRDX6P30041 224 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 PMELP40967 661 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 SLC6A9P48067 706 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 HOXA4Q00056 320 aaPredicted RBP14.37□□□□□ -0.11
CPSF4-203ENST00000430038 RFX4Q33E94 735 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 KRTAP27-1Q3LI81 207 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 HSP90B2PQ58FF3 399 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 KLF17Q5JT82 389 aaPredicted RBP14.37□□□□□ -0.11
CPSF4-203ENST00000430038 LINC00346Q8IVM7 164 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 OR4K13Q8NH42 304 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 CMTM5Q96DZ9 223 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 PYURFQ96I23 114 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 OR52D1Q9H346 318 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 PATZ1Q9HBE1 687 aaKnown RBP14.37□□□□□ -0.11
CPSF4-203ENST00000430038 GCM1Q9NP62 436 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 ARL8BQ9NVJ2 186 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 IL19Q9UHD0 177 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 AURKCQ9UQB9 309 aa14.37□□□□□ -0.11
CPSF4-203ENST00000430038 OR6C68A6NDL8 312 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 F5H0A9 414 aaPredicted RBP14.36□□□□□ -0.11
CPSF4-203ENST00000430038 J3QLI3 93 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 PSKH1P11801 424 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 RAC2P15153 192 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 GYS2P54840 703 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 SLC3A1Q07837 685 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 FAM201AQ5SY85 155 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 LEG1Q6P5S2 330 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 FBXW12Q6X9E4 464 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 CFAP77Q6ZQR2 320 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 COLCA1Q6ZS62 124 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 USP43Q70EL4 1123 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 ADCK1Q86TW2 530 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 BCL6BQ8N143 479 aaPredicted RBP14.36□□□□□ -0.11
CPSF4-203ENST00000430038 SLC26A10Q8NG04 563 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 OR10AD1Q8NGE0 317 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 ZFAND2BQ8WV99 257 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 DDOQ99489 341 aa14.36□□□□□ -0.11
CPSF4-203ENST00000430038 PNRC2Q9NPJ4 139 aaKnown RBP14.36□□□□□ -0.11
CPSF4-203ENST00000430038 SAMD4AQ9UPU9 718 aaKnown RBP14.36□□□□□ -0.11
CPSF4-203ENST00000430038 SOX21Q9Y651 276 aaPredicted RBP14.36□□□□□ -0.11
CPSF4-203ENST00000430038 C5orf63A6NC05 138 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 TMEM178BH3BS89 294 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 NDUFAB1O14561 156 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 GADD45GO95257 159 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 HSD17B1P14061 328 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 TUBG1P23258 451 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 GSSP48637 474 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 CENPAP49450 140 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 MMP16P51512 607 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 RPS6KA3P51812 740 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 PAX2Q02962 417 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 COX10Q12887 443 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 ZMAT1Q5H9K5 638 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 ZNF362Q5T0B9 420 aaPredicted RBP14.35□□□□□ -0.11
CPSF4-203ENST00000430038 SLC18B1Q6NT16 456 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 OR8G5Q8NG78 346 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 NANPQ8TBE9 248 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 ZNF418Q8TF45 676 aaPredicted RBP14.35□□□□□ -0.11
CPSF4-203ENST00000430038 FAM216AQ8WUB2 273 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 CDRT15Q96T59 188 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 C1QTNF5Q9BXJ0 243 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 TUBG2Q9NRH3 451 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 MRPL22Q9NWU5 206 aaKnown RBP14.35□□□□□ -0.11
CPSF4-203ENST00000430038 PPP1R3CQ9UQK1 317 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 POLR3KQ9Y2Y1 108 aaPredicted RBP14.35□□□□□ -0.11
CPSF4-203ENST00000430038 TRRAPQ9Y4A5 3859 aa14.35□□□□□ -0.11
CPSF4-203ENST00000430038 TMEM89A2RUT3 159 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 F5H5P2 479 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 ARPC2O15144 300 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 ARPC3O15145 178 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 CYB5R3P00387 301 aaPredicted RBP14.34□□□□□ -0.11
CPSF4-203ENST00000430038 HLA-DPB1P04440 258 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 GGT2P36268 569 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 RPS27P42677 84 aaKnown RBP14.34□□□□□ -0.11
CPSF4-203ENST00000430038 COMPP49747 757 aaPredicted RBP14.34□□□□□ -0.11
CPSF4-203ENST00000430038 BTG1P62324 171 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 SPIBQ01892 262 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 TMEM155Q4W5P6 130 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 SLC35F1Q5T1Q4 408 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 LYPD4Q6UWN0 246 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 C12orf54Q6X4T0 127 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 ZBTB46Q86UZ6 589 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 ATG16L2Q8NAA4 619 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 BHLHE23Q8NDY6 225 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 OR10S1Q8NGN2 331 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 FANK1Q8TC84 345 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 ST7LQ8TDW4 575 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 MEGF10Q96KG7 1140 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 C1orf147Q96MC9 270 aaPredicted RBP14.34□□□□□ -0.11
CPSF4-203ENST00000430038 COQ7Q99807 217 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 SLC30A2Q9BRI3 323 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms