RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PTGER4P35408 488 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 HOXA1P49639 335 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-207ENST00000429896 CLN3Q13286 438 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 PBDC1Q9BVG4 233 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 PRR19A6NJB7 356 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 CLEC3BP05452 202 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 MAKP20794 623 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 EMX1Q04741 257 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-207ENST00000429896 MEP1BQ16820 701 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 ESCO2Q56NI9 601 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 KLK13Q9UKR3 277 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 A0A1B0GVG6 124 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 ZNF17P17021 662 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 OPRL1P41146 370 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 KLRB1Q12918 225 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 TOMM34Q15785 309 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-207ENST00000429896 TPRA1Q86W33 373 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 PARD6AQ9NPB6 346 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 GREB1Q4ZG55 1949 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 IFNA10P01566 189 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 MGST1P10620 155 aaKnown RBP11.6□□□□□ -0.55
PTCH1-207ENST00000429896 B4GALT1P15291 398 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 C3AR1Q16581 482 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 C17orf82Q86X59 251 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-207ENST00000429896 CCDC28AQ8IWP9 274 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 BSCL2Q96G97 398 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-207ENST00000429896 GAAP10253 952 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 SPI1P17947 270 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 PRKACBP22694 351 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 PRSS3P35030 304 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 FOXB2Q5VYV0 432 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 OR52N5Q8NH56 324 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 DEDD2Q8WXF8 326 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 GFOD1Q9NXC2 390 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 LRRTM2O43300 516 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 UBL3O95164 117 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 POLR2IP36954 125 aaKnown RBP11.6□□□□□ -0.55
PTCH1-207ENST00000429896 SNRPGP62308 76 aaKnown RBP11.6□□□□□ -0.55
PTCH1-207ENST00000429896 CEACAM16Q2WEN9 425 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 ENTHD1Q8IYW4 607 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 GPR32P1Q8NGA4 272 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 PDCD1LG2Q9BQ51 273 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 KCNJ16Q9NPI9 418 aa11.6□□□□□ -0.55
PTCH1-207ENST00000429896 A0A1B0GTH9 108 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 TMEM212A6NML5 194 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 MASP2O00187 686 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 GLSO94925 669 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-207ENST00000429896 GNB1P62873 340 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 ALKBH3Q96Q83 286 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-207ENST00000429896 CCDC32Q9BV29 185 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 PLCXD1Q9NUJ7 323 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 OSGIN2Q9Y236 505 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 HSPB2A8KAH6 182 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 ZNF705GA8MUZ8 300 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-207ENST00000429896 TRAPPC2LH3BP13 241 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 LPLP06858 475 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 KIR2DL3P43628 341 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 AGFG1P52594 562 aaKnown RBP11.59□□□□□ -0.55
PTCH1-207ENST00000429896 CLDN12P56749 244 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 IGLV3-21P80748 117 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-207ENST00000429896 GK2Q14410 553 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-207ENST00000429896 HSPB2Q16082 182 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 OR14A2Q96R54 314 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 VRK1Q99986 396 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-207ENST00000429896 ANGPTL4Q9BY76 406 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 EGLN1Q9GZT9 426 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 CPNE5Q9HCH3 593 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 ASH2LQ9UBL3 628 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 AQP7O14520 342 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 HSD17B6O14756 317 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 ATXN7O15265 892 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-207ENST00000429896 RAC3P60763 192 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 PGAP1Q75T13 922 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 ASCL5Q7RTU5 278 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 CPEB3Q8NE35 698 aaKnown RBP11.59□□□□□ -0.55
PTCH1-207ENST00000429896 FOXRED1Q96CU9 486 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-207ENST00000429896 CNTNAP3BQ96NU0 1288 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 GPR27Q9NS67 375 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 KCNG2Q9UJ96 466 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 ZNF281Q9Y2X9 895 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 HSBP1L1C9JCN9 74 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 RAD52P43351 418 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 MKXQ8IYA7 352 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 OR13F1Q8NGS4 319 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 ELMOD3Q96FG2 381 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 FOXB1Q99853 325 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 EHFQ9NZC4 300 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 TRAPPC2LQ9UL33 140 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 C5orf49A4QMS7 147 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 ZNF736B4DX44 427 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-207ENST00000429896 CCL21O00585 134 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 SLC2A1P11166 492 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 VEGFCP49767 419 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 SKP2Q13309 424 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 AARDQ4LEZ3 155 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 ZMAT1Q5H9K5 638 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 BCDIN3DQ7Z5W3 292 aaKnown RBP11.59□□□□□ -0.55
PTCH1-207ENST00000429896 PCNPQ8WW12 178 aaKnown RBP11.59□□□□□ -0.55
PTCH1-207ENST00000429896 HRH4Q9H3N8 390 aa11.59□□□□□ -0.55
PTCH1-207ENST00000429896 FLRT3Q9NZU0 649 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms