RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 CD1BP29016 333 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 P2RY4P51582 365 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 MOB3AQ96BX8 217 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 SUCNR1Q9BXA5 334 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 LAMP3Q9UQV4 416 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 KIAA1549LQ6ZVL6 1849 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 STATHP02808 62 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 ELNP15502 786 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 ATF1P18846 271 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 FZD2Q14332 565 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 PLAC9Q5JTB6 97 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 FAM74A1Q5RGS3 127 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 PHF19Q5T6S3 580 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 PIANPQ8IYJ0 282 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 P2RX4Q99571 388 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 HRASLSQ9HDD0 168 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 ADAMTS5Q9UNA0 930 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 ZFP30Q9Y2G7 519 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 CHTOPQ9Y3Y2 248 aaKnown RBP6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 LINC00587B1AMM8 73 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 EEF1E1-BLOC1S5C9J1V9 151 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 ABHD4Q8TB40 342 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 TMEM40Q8WWA1 233 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 DGAT2Q96PD7 388 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 SMOC1Q9H4F8 434 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF223Q9UK11 482 aaPredicted RBP6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 SNX11Q9Y5W9 270 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 SCO1O75880 301 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 MMP23AO75900 390 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 LIPFP07098 398 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 C8AP07357 584 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 HTR6P50406 440 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 CSNK1G2P78368 415 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 TMEM229BQ8NBD8 167 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 CSF3RQ99062 836 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 RNF2Q99496 336 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 UTP23Q9BRU9 249 aaKnown RBP6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 MED13Q9UHV7 2174 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 MSTNO14793 375 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 ITGB2P05107 769 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 HCKP08631 526 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 F2RP25116 425 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 TSFMP43897 325 aaKnown RBP6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 MMP16P51512 607 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF805Q5CZA5 627 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 TMEM184AQ6ZMB5 413 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF383Q8NA42 475 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 PPP1R3CQ9UQK1 317 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 TRAV18A0A075B6X5 111 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 EMC8O43402 210 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 SCGB2A1O75556 95 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 GJB5O95377 273 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 ICAM2P13598 275 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 ALKAL1Q6UXT8 129 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 TMEM19Q96HH6 336 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 MEGF10Q96KG7 1140 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 MS4A4EQ96PG1 132 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 GRHPRQ9UBQ7 328 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 WSB1Q9Y6I7 421 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 A0A1B0GW64 132 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 TLCD2A6NGC4 264 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 CNMDO75829 334 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 STC2O76061 302 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 HOXC13P31276 330 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 ACTR1BP42025 376 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 SLC8B1Q6J4K2 584 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 LYPD8Q6UX82 237 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 Q6ZTK2 550 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 CPOQ8IVL8 374 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 MCHR2Q969V1 340 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 DNAJC25-GNG10A0A024R161 153 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 CCDC187A0A096LP49 1063 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 TFPIP10646 304 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 SPNP16150 400 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 EBPQ15125 230 aaKnown RBP6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 EXT1Q16394 746 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 SPRYD7Q5W111 196 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 CD200R1LQ6Q8B3 271 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 BTNL8Q6UX41 500 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF836Q6ZNA1 936 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 TMED6Q8WW62 240 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 KHSRPQ92945 711 aaKnown RBP eCLIP6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 RPUSD4Q96CM3 377 aaKnown RBP6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 MRPL37Q9BZE1 423 aaKnown RBP6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 MTHFD2LQ9H903 347 aaPredicted RBP6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 PEF1Q9UBV8 284 aaKnown RBP6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 EML5Q05BV3 1969 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 MAP1LC3B2A6NCE7 125 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 C2orf78A6NCI8 922 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 H7C1C5 153 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 SIAH2O43255 324 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 FXYD6P3P58550 94 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 CBFBQ13951 182 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 VITQ6UXI7 678 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 MDGA1Q8NFP4 955 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 GOT1L1Q8NHS2 421 aaPredicted RBP6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 PPP1R1CQ8WVI7 109 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 FAM71F1Q96KD3 344 aaPredicted RBP6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 MAP1LC3BQ9GZQ8 125 aa6.89□□□□□ -1.31
SYNPO2-202ENST00000429713 MRPS18AQ9NVS2 196 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms