RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 ZFP36P26651 326 aaKnown RBP17.55■□□□□ 0.4
UBXN4-204ENST00000426921 CRABP1P29762 137 aa17.55■□□□□ 0.4
UBXN4-204ENST00000426921 BTG1P62324 171 aa17.55■□□□□ 0.4
UBXN4-204ENST00000426921 COX10Q12887 443 aa17.55■□□□□ 0.4
UBXN4-204ENST00000426921 KRT72Q14CN4 511 aa17.55■□□□□ 0.4
UBXN4-204ENST00000426921 TUSC1Q2TAM9 212 aa17.55■□□□□ 0.4
UBXN4-204ENST00000426921 LRRC28Q86X40 367 aaPredicted RBP17.55■□□□□ 0.4
UBXN4-204ENST00000426921 GJC3Q8NFK1 279 aa17.55■□□□□ 0.4
UBXN4-204ENST00000426921 OR52J3Q8NH60 311 aa17.55■□□□□ 0.4
UBXN4-204ENST00000426921 FANK1Q8TC84 345 aa17.55■□□□□ 0.4
UBXN4-204ENST00000426921 ITLN1Q8WWA0 313 aa17.55■□□□□ 0.4
UBXN4-204ENST00000426921 OR2V2Q96R30 315 aa17.55■□□□□ 0.4
UBXN4-204ENST00000426921 PATZ1Q9HBE1 687 aaKnown RBP17.55■□□□□ 0.4
UBXN4-204ENST00000426921 ADA2Q9NZK5 511 aa17.55■□□□□ 0.4
UBXN4-204ENST00000426921 PPP1R3CQ9UQK1 317 aa17.55■□□□□ 0.4
UBXN4-204ENST00000426921 A8MXK9 166 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 TRIM77I1YAP6 450 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 GMNNO75496 209 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 RGS9O75916 674 aaPredicted RBP17.54■□□□□ 0.4
UBXN4-204ENST00000426921 PPP1R3DO95685 299 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 SBK2P0C263 348 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 HSD17B1P14061 328 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 FPR3P25089 353 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 MMP16P51512 607 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 SMIM11AP58511 58 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 ZMYND11Q15326 602 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 RFX4Q33E94 735 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 KRTAP27-1Q3LI81 207 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 C1orf94Q6P1W5 598 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 ZNF771Q7L3S4 317 aaPredicted RBP17.54■□□□□ 0.4
UBXN4-204ENST00000426921 KLHL36Q8N4N3 616 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 RNF148Q8N7C7 305 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 DEFB108BQ8NET1 73 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 OR5L1Q8NGL2 311 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 APOBEC3DQ96AK3 386 aaPredicted RBP17.54■□□□□ 0.4
UBXN4-204ENST00000426921 PYURFQ96I23 114 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 TSSK2Q96PF2 358 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 SLC6A7Q99884 636 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 RBM4Q9BWF3 364 aaKnown RBP17.54■□□□□ 0.4
UBXN4-204ENST00000426921 OR52D1Q9H346 318 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 MAGEL2Q9UJ55 1249 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 POLR1DQ9Y2S0 133 aa17.54■□□□□ 0.4
UBXN4-204ENST00000426921 ARHGAP32A7KAX9 2087 aa17.53■□□□□ 0.4
UBXN4-204ENST00000426921 A0A1B0GWJ7 208 aa17.53■□□□□ 0.4
UBXN4-204ENST00000426921 TMEM89A2RUT3 159 aa17.53■□□□□ 0.4
UBXN4-204ENST00000426921 IFNL4K9M1U5 179 aa17.53■□□□□ 0.4
UBXN4-204ENST00000426921 SNX3O60493 162 aa17.53■□□□□ 0.4
UBXN4-204ENST00000426921 CFPP27918 469 aa17.53■□□□□ 0.4
UBXN4-204ENST00000426921 SLC6A6P31641 620 aa17.53■□□□□ 0.4
UBXN4-204ENST00000426921 SLC6A9P48067 706 aa17.53■□□□□ 0.4
UBXN4-204ENST00000426921 SLC27A4Q6P1M0 643 aa17.53■□□□□ 0.4
UBXN4-204ENST00000426921 COLCA1Q6ZS62 124 aa17.53■□□□□ 0.4
UBXN4-204ENST00000426921 SLC26A10Q8NG04 563 aa17.53■□□□□ 0.4
UBXN4-204ENST00000426921 ERMAPQ96PL5 475 aaPredicted RBP17.53■□□□□ 0.4
UBXN4-204ENST00000426921 GCM1Q9NP62 436 aa17.53■□□□□ 0.4
UBXN4-204ENST00000426921 B9D1Q9UPM9 204 aa17.53■□□□□ 0.4
UBXN4-204ENST00000426921 TMEM178BH3BS89 294 aa17.52■□□□□ 0.4
UBXN4-204ENST00000426921 GADD45GO95257 159 aa17.52■□□□□ 0.4
UBXN4-204ENST00000426921 GPANK1O95872 356 aa17.52■□□□□ 0.4
UBXN4-204ENST00000426921 RBMXP38159 391 aaKnown RBP17.52■□□□□ 0.4
UBXN4-204ENST00000426921 MDH2P40926 338 aaKnown RBP17.52■□□□□ 0.4
UBXN4-204ENST00000426921 ACTG1P63261 375 aa17.52■□□□□ 0.4
UBXN4-204ENST00000426921 SPIBQ01892 262 aa17.52■□□□□ 0.4
UBXN4-204ENST00000426921 HLXQ14774 488 aaPredicted RBP17.52■□□□□ 0.4
UBXN4-204ENST00000426921 MEP1BQ16820 701 aa17.52■□□□□ 0.4
UBXN4-204ENST00000426921 LEG1Q6P5S2 330 aa17.52■□□□□ 0.4
UBXN4-204ENST00000426921 ZBTB46Q86UZ6 589 aa17.52■□□□□ 0.4
UBXN4-204ENST00000426921 OR6V1Q8N148 313 aa17.52■□□□□ 0.4
UBXN4-204ENST00000426921 OR8G5Q8NG78 346 aa17.52■□□□□ 0.4
UBXN4-204ENST00000426921 DVL3Q92997 716 aaPredicted RBP17.52■□□□□ 0.4
UBXN4-204ENST00000426921 POP5Q969H6 163 aaKnown RBP17.52■□□□□ 0.4
UBXN4-204ENST00000426921 MMP26Q9NRE1 261 aa17.52■□□□□ 0.4
UBXN4-204ENST00000426921 PTTG3PQ9NZH4 202 aa17.52■□□□□ 0.4
UBXN4-204ENST00000426921 CD300AQ9UGN4 299 aa17.52■□□□□ 0.4
UBXN4-204ENST00000426921 IQCF6A8MYZ5 107 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 HIST1H1CP16403 213 aaKnown RBP17.51■□□□□ 0.39
UBXN4-204ENST00000426921 ZNF12P17014 697 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 CPT2P23786 658 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 GSSP48637 474 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 RSPO1Q2MKA7 263 aaPredicted RBP17.51■□□□□ 0.39
UBXN4-204ENST00000426921 OR2T2Q6IF00 324 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 JAZF1Q86VZ6 243 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 PGAM4Q8N0Y7 254 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 OR5AS1Q8N127 324 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 MUC20Q8N307 709 aaPredicted RBP17.51■□□□□ 0.39
UBXN4-204ENST00000426921 BPIFB2Q8N4F0 458 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 OR13G1Q8NGZ3 307 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 MEGF10Q96KG7 1140 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 NMNAT3Q96T66 252 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 SLC30A2Q9BRI3 323 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 C1QTNF5Q9BXJ0 243 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 ESM1Q9NQ30 184 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 V9GYQ6 96 aa17.51■□□□□ 0.39
UBXN4-204ENST00000426921 TRAPPC2LH3BP13 241 aa17.5■□□□□ 0.39
UBXN4-204ENST00000426921 MLNRO43193 412 aa17.5■□□□□ 0.39
UBXN4-204ENST00000426921 FSTL3O95633 263 aa17.5■□□□□ 0.39
UBXN4-204ENST00000426921 RENP00797 406 aa17.5■□□□□ 0.39
UBXN4-204ENST00000426921 SEC61A1P61619 476 aaKnown RBP17.5■□□□□ 0.39
UBXN4-204ENST00000426921 ZNF154Q13106 437 aa17.5■□□□□ 0.39
UBXN4-204ENST00000426921 ZNF181Q2M3W8 571 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms