RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 PGAM2P15259 253 aa14.43□□□□□ -0.1
PKP4-205ENST00000426248 RBP2P50120 134 aa14.43□□□□□ -0.1
PKP4-205ENST00000426248 ATP1B3P54709 279 aa14.43□□□□□ -0.1
PKP4-205ENST00000426248 NRG3P56975 720 aa14.43□□□□□ -0.1
PKP4-205ENST00000426248 PCBP3P57721 371 aaKnown RBP14.43□□□□□ -0.1
PKP4-205ENST00000426248 S100A10P60903 97 aa14.43□□□□□ -0.1
PKP4-205ENST00000426248 AKR1C8PQ5T2L2 129 aa14.43□□□□□ -0.1
PKP4-205ENST00000426248 MRM1Q6IN84 353 aaKnown RBP14.43□□□□□ -0.1
PKP4-205ENST00000426248 ACOT7LQ6ZUV0 252 aa14.43□□□□□ -0.1
PKP4-205ENST00000426248 PILRAQ9UKJ1 303 aa14.43□□□□□ -0.1
PKP4-205ENST00000426248 PTRH2Q9Y3E5 179 aaKnown RBP14.43□□□□□ -0.1
PKP4-205ENST00000426248 KDM4EB2RXH2 506 aaPredicted RBP14.42□□□□□ -0.1
PKP4-205ENST00000426248 SURF4O15260 269 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 OR2F2O95006 317 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 FXYD6P3P58550 94 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 PLCXD2Q0VAA5 305 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 OR2F1Q13607 317 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 C1orf94Q6P1W5 598 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 ZBTB8AQ96BR9 441 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 SIRT3Q9NTG7 399 aaPredicted RBP14.42□□□□□ -0.1
PKP4-205ENST00000426248 GSKIPQ9P0R6 139 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 TAS2R20P59543 309 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 ZG16BQ96DA0 208 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 OR10A5Q9H207 317 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 ZMAT3Q9HA38 289 aaKnown RBP14.42□□□□□ -0.1
PKP4-205ENST00000426248 V9GY05 133 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 HCRTR2O43614 444 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 RAB3DO95716 219 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 CHRM4P08173 479 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 PNLIPRP2P54317 469 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 MRPS10P82664 201 aaKnown RBP14.42□□□□□ -0.1
PKP4-205ENST00000426248 CD163Q86VB7 1156 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 STT3BQ8TCJ2 826 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 HIST1H2BAQ96A08 127 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 ATG5Q9H1Y0 275 aa14.42□□□□□ -0.1
PKP4-205ENST00000426248 MED12Q93074 2177 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 PRH1P02810 166 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 MT-ND4LP03901 98 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 DBIP07108 87 aaKnown RBP14.41□□□□□ -0.1
PKP4-205ENST00000426248 CALCRP30988 508 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 OTX2P32243 289 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 SEMA6DQ8NFY4 1073 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 NKX3-1Q99801 234 aaPredicted RBP14.41□□□□□ -0.1
PKP4-205ENST00000426248 ATG101Q9BSB4 218 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 OR52D1Q9H346 318 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 APMAPQ9HDC9 416 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 MMP24Q9Y5R2 645 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 SNRNP200O75643 2136 aaKnown RBP14.41□□□□□ -0.1
PKP4-205ENST00000426248 SLC22A31A6NKX4 558 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 CD3DP04234 171 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 AKAIN1P0CW23 69 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 DCDP81605 110 aaKnown RBP14.41□□□□□ -0.1
PKP4-205ENST00000426248 FAM219AQ8IW50 185 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 C8orf44Q96CB5 159 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 RNASEK-C17orf49H0YIS7 233 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 DCTN6O00399 190 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 UBE2CO00762 179 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 DHODHQ02127 395 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 EIF2B1Q14232 305 aaKnown RBP14.41□□□□□ -0.1
PKP4-205ENST00000426248 FAM199XQ6PEV8 388 aaPredicted RBP14.41□□□□□ -0.1
PKP4-205ENST00000426248 HIST2H3AQ71DI3 136 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 SHISA5Q8N114 240 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 KCNRGQ8N5I3 272 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 TMEM255BQ8WV15 326 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 SEC11CQ9BY50 192 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 DEFB126Q9BYW3 111 aa14.41□□□□□ -0.1
PKP4-205ENST00000426248 FAM171A2A8MVW0 826 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 EDN3P14138 238 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 HSD17B7P56937 341 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 ELFN2Q5R3F8 820 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 C11orf87Q6NUJ2 197 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 IL22RA1Q8N6P7 574 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 C15orf54Q8N8G6 183 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 FOXRED1Q96CU9 486 aaPredicted RBP14.4□□□□□ -0.1
PKP4-205ENST00000426248 TMEM68Q96MH6 324 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 LMF1Q96S06 567 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 POTEKPQ9BYX7 375 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 UBQLN3Q9H347 655 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 NRIP3Q9NQ35 241 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 C19orf53Q9UNZ5 99 aaPredicted RBP14.4□□□□□ -0.1
PKP4-205ENST00000426248 PUS1Q9Y606 427 aaKnown RBP eCLIP14.4□□□□□ -0.1
PKP4-205ENST00000426248 NOTCH3Q9UM47 2321 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 C19orf67A6NJJ6 358 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 PEX12O00623 359 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 OR4E1P0C645 316 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 SP9P0CG40 484 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 SRMP19623 302 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 TAS2R60P59551 318 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 AADACL4Q5VUY2 407 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 OGFOD3Q6PK18 319 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 GALNTL5Q7Z4T8 443 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 SAP25Q8TEE9 199 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 SLC6A7Q99884 636 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 G6PC3Q9BUM1 346 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 FKRPQ9H9S5 495 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 A4GALTQ9NPC4 353 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 SEMA4GQ9NTN9 838 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 MDC1Q14676 2089 aaKnown RBP14.4□□□□□ -0.1
PKP4-205ENST00000426248 SULT2B1O00204 365 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 NKX6-1P78426 367 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms