RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ZNF432O94892 652 aa12□□□□□ -0.49
USP42-203ENST00000426246 PGCP20142 388 aa12□□□□□ -0.49
USP42-203ENST00000426246 RBM34P42696 430 aaKnown RBP12□□□□□ -0.49
USP42-203ENST00000426246 GUCA1AP43080 201 aaPredicted RBP12□□□□□ -0.49
USP42-203ENST00000426246 OR3A2P47893 321 aa12□□□□□ -0.49
USP42-203ENST00000426246 CXCL12P48061 93 aa12□□□□□ -0.49
USP42-203ENST00000426246 MC2RQ01718 297 aa12□□□□□ -0.49
USP42-203ENST00000426246 FHL1Q13642 323 aa12□□□□□ -0.49
USP42-203ENST00000426246 SLC26A10Q8NG04 563 aa12□□□□□ -0.49
USP42-203ENST00000426246 PPP1R1CQ8WVI7 109 aa12□□□□□ -0.49
USP42-203ENST00000426246 C4orf45Q96LM5 186 aa12□□□□□ -0.49
USP42-203ENST00000426246 OPN4Q9UHM6 478 aa12□□□□□ -0.49
USP42-203ENST00000426246 SERTAD3Q9UJW9 196 aa12□□□□□ -0.49
USP42-203ENST00000426246 PLCL2Q9UPR0 1127 aa12□□□□□ -0.49
USP42-203ENST00000426246 OR5H14A6NHG9 310 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 GDF9O60383 454 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 RRASP10301 218 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 C19orf57Q0VDD7 668 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 SLC17A1Q14916 467 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 ELOCQ15369 112 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 C1orf140Q5VVS0 124 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 ANGPTL5Q86XS5 388 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 OR52N4Q8NGI2 321 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 MARCH1Q8TCQ1 289 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 PTPMT1Q8WUK0 201 aaPredicted RBP11.99□□□□□ -0.49
USP42-203ENST00000426246 TMED6Q8WW62 240 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 CTHRC1Q96CG8 243 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 S100A13Q99584 98 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 TMEM212A6NML5 194 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 FOLR1P15328 257 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 OGFOD3Q6PK18 319 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 TMEM17Q86X19 198 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 OR2I1PQ8NGU4 316 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 JAM3Q9BX67 310 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 ZNF768Q9H5H4 540 aaKnown RBP11.99□□□□□ -0.49
USP42-203ENST00000426246 APMAPQ9HDC9 416 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 PIPOXQ9P0Z9 390 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 HHLA2Q9UM44 414 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 BDP1A6H8Y1 2624 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 RPS10-NUDT3A0A1W2PQS6 291 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 PRSS37A4D1T9 235 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 METTL21EPA6NDL7 271 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 CSF1P09603 554 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 PRKACAP17612 351 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 FJX1Q86VR8 437 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 OR4D6Q8NGJ1 314 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 SLC39A7Q92504 469 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 TOMM40LQ969M1 308 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 LMF2Q9BU23 707 aaKnown RBP11.99□□□□□ -0.49
USP42-203ENST00000426246 FGF21Q9NSA1 209 aa11.99□□□□□ -0.49
USP42-203ENST00000426246 ADAMTS20P59510 1910 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 XRCC3O43542 346 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 SRPX2O60687 465 aaPredicted RBP11.98□□□□□ -0.49
USP42-203ENST00000426246 PRAF2O60831 178 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 PDGFBP01127 241 aaPredicted RBP11.98□□□□□ -0.49
USP42-203ENST00000426246 ERCC1P07992 297 aaPredicted RBP11.98□□□□□ -0.49
USP42-203ENST00000426246 RPS4Y1P22090 263 aaKnown RBP11.98□□□□□ -0.49
USP42-203ENST00000426246 CCNOP22674 350 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 ABCD3P28288 659 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 CLLU1Q5K131 121 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 PRSS42Q7Z5A4 293 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 ATG4DQ86TL0 474 aaPredicted RBP11.98□□□□□ -0.49
USP42-203ENST00000426246 LSMEM1Q8N8F7 131 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 OTOSQ8NHW6 89 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 NICN1Q9BSH3 213 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 OR52A1Q9UKL2 312 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 LOC100289279A0A1B0GTE1 492 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 OR14I1A6ND48 311 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 LMO7DNF2Z398 122 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 H7C417 338 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 ADAP1O75689 374 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 NMBP08949 121 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 SERPINA2P20848 420 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 CAPZBP47756 277 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 EMP2P54851 167 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 INSM1Q01101 510 aaPredicted RBP11.98□□□□□ -0.49
USP42-203ENST00000426246 ZNF626Q68DY1 528 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 FAM57BQ71RH2 274 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 LRRC46Q96FV0 321 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 ZNF304Q9HCX3 659 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 MBD2Q9UBB5 411 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 ASH2LQ9UBL3 628 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 MTFP1Q9UDX5 166 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 MLXQ9UH92 298 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 IGKV1D-43A0A0B4J1Z2 117 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 GABRA4P48169 554 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 RASGEF1BQ0VAM2 473 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 DHRS2Q13268 280 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 OR2AJ1Q8NGZ0 328 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 CCDC107Q8WV48 283 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 RADILQ96JH8 1075 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 DMRTA2Q96SC8 542 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 PPA2Q9H2U2 334 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 HAO2Q9NYQ3 351 aa11.98□□□□□ -0.49
USP42-203ENST00000426246 FER1L5A0AVI2 2057 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 LOC105371267A0A1B0GV96 52 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 CDK2AP1O14519 115 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 ARPC3O15145 178 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 GABRR1P24046 479 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 HOXA6P31267 233 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms