RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 AK6Q9Y3D8 172 aaKnown RBP13.37□□□□□ -0.27
ACTB-204ENST00000425660 DNAJC13O75165 2243 aa13.37□□□□□ -0.27
ACTB-204ENST00000425660 MGAQ8IWI9 3026 aa13.37□□□□□ -0.27
ACTB-204ENST00000425660 BOD1L1Q8NFC6 3051 aa13.37□□□□□ -0.27
ACTB-204ENST00000425660 LOC107986453A0A1B0GWG9 222 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 IFITM5A6NNB3 132 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 AIPO00170 330 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 AQP7O14520 342 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 HPGDSO60760 199 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 ADRA2CP18825 462 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 HSD11B1P28845 292 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 OTX1P32242 354 aaPredicted RBP13.36□□□□□ -0.27
ACTB-204ENST00000425660 CEACAM16Q2WEN9 425 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 TSPO2Q5TGU0 170 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 METAP1DQ6UB28 335 aaPredicted RBP13.36□□□□□ -0.27
ACTB-204ENST00000425660 PLXDC2Q6UX71 529 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 SNX29P2Q8IUI4 249 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 SIAH3Q8IW03 269 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 TSEN15Q8WW01 171 aaKnown RBP13.36□□□□□ -0.27
ACTB-204ENST00000425660 PBOV1Q9GZY1 135 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 SLC25A18Q9H1K4 315 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 DKK4Q9UBT3 224 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 DHDHQ9UQ10 334 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 CEP295Q9C0D2 2601 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 PHF3Q92576 2039 aaKnown RBP13.36□□□□□ -0.27
ACTB-204ENST00000425660 TRAV8-7A0A075B6U6 113 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 ISPDA4D126 451 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 FABP12A6NFH5 140 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 TTLL8A6PVC2 850 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 CD2P06729 351 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 ACSM4P0C7M7 580 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 SLC2A2P11168 524 aaPredicted RBP13.36□□□□□ -0.27
ACTB-204ENST00000425660 FSTP19883 344 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 PTBP1P26599 531 aaKnown RBP eCLIP13.36□□□□□ -0.271e-8■■■■■ 33.5
ACTB-204ENST00000425660 RGS21Q2M5E4 152 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 CCDC92Q53HC0 331 aaPredicted RBP13.36□□□□□ -0.27
ACTB-204ENST00000425660 ASPHD2Q6ICH7 369 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 ZNF627Q7L945 461 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 PRSS45Q7RTY3 260 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 LRRC28Q86X40 367 aaPredicted RBP13.36□□□□□ -0.27
ACTB-204ENST00000425660 SPACA3Q8IXA5 215 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 LRRC18Q8N456 261 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 KCNJ15Q99712 375 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 WACQ9BTA9 647 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 SRRQ9GZT4 340 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 SLC7A10Q9NS82 523 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 ADAM30Q9UKF2 790 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 V9GY05 133 aa13.36□□□□□ -0.27
ACTB-204ENST00000425660 A0A1B0GVG6 124 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 TBX1O43435 398 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 TGM6O95932 706 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 FCGR2AP12318 317 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 PSMD7P51665 324 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 RIN1Q13671 783 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 TAF13Q15543 124 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 ELFN2Q5R3F8 820 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 XKRXQ6PP77 449 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 LYSMD2Q8IV50 215 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 SLC22A24Q8N4F4 322 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 CHPT1Q8WUD6 406 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 TAAR6Q96RI8 345 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 MRI1Q9BV20 369 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 CALHM2Q9HA72 323 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 CYSLTR2Q9NS75 346 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 FOXJ3Q9UPW0 622 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 CAMK2AQ9UQM7 478 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 SLC5A6Q9Y289 635 aa13.35□□□□□ -0.27
ACTB-204ENST00000425660 APC2O95996 2303 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 SLC22A20A6NK97 555 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 PAHP00439 452 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 PDGFAP04085 211 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 B4GALT1P15291 398 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 IGFBP3P17936 291 aaPredicted RBP13.34□□□□□ -0.27
ACTB-204ENST00000425660 EIF2S3P41091 472 aaKnown RBP13.34□□□□□ -0.27
ACTB-204ENST00000425660 CX3CR1P49238 355 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 ZNF121P58317 390 aaPredicted RBP13.34□□□□□ -0.27
ACTB-204ENST00000425660 RSPO1Q2MKA7 263 aaPredicted RBP13.34□□□□□ -0.27
ACTB-204ENST00000425660 STEAP3Q658P3 488 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 CNIH2Q6PI25 160 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 FAM131AQ6UXB0 335 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 TRMT10AQ8TBZ6 339 aaKnown RBP13.34□□□□□ -0.27
ACTB-204ENST00000425660 CMTM3Q96MX0 182 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 HDHD2Q9H0R4 259 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 PPP1R3EQ9H7J1 279 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 SPATA2Q9UM82 520 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 NCOR2Q9Y618 2525 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 NCOA6Q14686 2063 aaPredicted RBP13.34□□□□□ -0.27
ACTB-204ENST00000425660 CD37P11049 281 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 ELK1P19419 428 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
ACTB-204ENST00000425660 PRKXP51817 358 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 SCRN3Q0VDG4 424 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 RPUSD3Q6P087 351 aaKnown RBP13.34□□□□□ -0.27
ACTB-204ENST00000425660 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.34□□□□□ -0.27
ACTB-204ENST00000425660 MCEMP1Q8IX19 187 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 ZNF433Q8N7K0 673 aaPredicted RBP13.34□□□□□ -0.27
ACTB-204ENST00000425660 GDPD1Q8N9F7 314 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 APH1AQ96BI3 265 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 SH3GL3Q99963 347 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 BRD7Q9NPI1 651 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms