RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ATPIF1Q9UII2 106 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 IGKV1D-43A0A0B4J1Z2 117 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 PHYHO14832 338 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 NDUFA7O95182 113 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 CYB5R3P00387 301 aaPredicted RBP10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 IFNW1P05000 195 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 FPR3P25089 353 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 OR1E2P47887 323 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 MMP16P51512 607 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SELENOWP63302 87 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 PRKCDQ05655 676 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 MZT1Q08AG7 82 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ENDOGQ14249 297 aaKnown RBP10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TAF9Q16594 264 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 LRRC23Q53EV4 343 aaPredicted RBP10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 METTL11BQ5VVY1 283 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 GPR139Q6DWJ6 353 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 OR2T2Q6IF00 324 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 FBXW12Q6X9E4 464 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 Q6YL49 198 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ZNF730Q6ZMV8 503 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 FKBP9P1Q75LS8 142 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 IGFN1Q86VF2 1251 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 JAZF1Q86VZ6 243 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 GLB1L2Q8IW92 636 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 POU5F2Q8N7G0 328 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 CELF2-AS1Q8N7Q2 184 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SCCPDHQ8NBX0 429 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 STON2Q8WXE9 905 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 LRTOMTQ8WZ04 291 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 DYRK2Q92630 601 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 PRRC1Q96M27 445 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ZNF570Q96NI8 536 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TECTBQ96PL2 329 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TMEM246Q9BRR3 403 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 PCGF1Q9BSM1 259 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SLC22A4Q9H015 551 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 EMC7Q9NPA0 242 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 INTS9Q9NV88 658 aaKnown RBP10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 DCAF16Q9NXF7 216 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 PTTG3PQ9NZH4 202 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TMEM5Q9Y2B1 443 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 FAM96BQ9Y3D0 163 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 RNF114Q9Y508 228 aa10.27□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ANK2Q01484 3957 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TEX13CA0A0J9YWL9 993 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 PRSS37A4D1T9 235 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 FBP2O00757 339 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SLC16A7O60669 478 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SHOX2O60902 331 aaPredicted RBP10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TOX4O94842 621 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 CD14P08571 375 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 CRABP1P29762 137 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 KDELR2P33947 212 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 FGF12P61328 243 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SELPLGQ14242 412 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ZNF404Q494X3 552 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SLC36A3Q495N2 470 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ZBED5Q49AG3 693 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 CYBRD1Q53TN4 286 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SPRNQ5BIV9 151 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 Q6ZR03 302 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 MOGAT3Q86VF5 341 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 NRMQ8IXM6 262 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 OR2AJ1Q8NGZ0 328 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ZNF420Q8TAQ5 688 aaPredicted RBP10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SPRYD4Q8WW59 207 aaPredicted RBP10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ACOT11Q8WXI4 607 aaPredicted RBP10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 C1orf147Q96MC9 270 aaPredicted RBP10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SIGLEC11Q96RL6 698 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 MMADHCQ9H3L0 296 aaPredicted RBP10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 PRDM13Q9H4Q3 707 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 AURKCQ9UQB9 309 aa10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 FAM32AQ9Y421 112 aaKnown RBP10.26□□□□□ -0.77
HLA-DQB3-203ENST00000425319 BBIP1A8MTZ0 92 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 GSTA4O15217 222 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ZNF205O95201 554 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TNFRSF1BP20333 461 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 RPS6KA3P51812 740 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ECH1Q13011 328 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 C11orf91Q3C1V1 193 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 WDR25Q64LD2 544 aaPredicted RBP10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 BRD3OSQ6XYD6 125 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 GDPGP1Q6ZNW5 385 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 MICU2Q8IYU8 434 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 DTX3Q8N9I9 347 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 OR10AD1Q8NGE0 317 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 C10orf82Q8WW14 230 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 WFDC12Q8WWY7 111 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 HDHD2Q9H0R4 259 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 FN3KRPQ9HA64 309 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TCF7L1Q9HCS4 588 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ACOXLQ9NUZ1 547 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ASH2LQ9UBL3 628 aa10.25□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TRAV27A0A087WT01 109 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TRAV38-1A0A0B4J264 116 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ELOVL7A1L3X0 281 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 IQCF6A8MYZ5 107 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ZNF879B4DU55 563 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms