RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SPHARQ15513 63 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 SLC36A2Q495M3 483 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 DMRTC1Q5HYR2 192 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 ZNF684Q5T5D7 378 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 LIPKQ5VXJ0 399 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 GJC3Q8NFK1 279 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 RORBQ92753 470 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 ATF6BQ99941 703 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 PDCD1LG2Q9BQ51 273 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 MROQ9BYG7 248 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 PIGMQ9H3S5 423 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 SLC17A5Q9NRA2 495 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 B3GNT2Q9NY97 397 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 ZNF319Q9P2F9 582 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 A6NIN4 97 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 C16orf97H3BN30 126 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 ABHD16AO95870 558 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 OPRL1P41146 370 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 ACTC1P68032 377 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 ACTA1P68133 377 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 SLC3A1Q07837 685 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 TMED1Q13445 227 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 ELFN2Q5R3F8 820 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.69□□□□□ -0.54
PRPF39-202ENST00000424478 ZNF485Q8NCK3 441 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 RNF133Q8WVZ7 376 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 WFIKKN1Q96NZ8 548 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 KCNN2Q9H2S1 579 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 TIMM10BQ9Y5J6 103 aa11.69□□□□□ -0.54
PRPF39-202ENST00000424478 SYNGR3O43761 229 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 KRT8P05787 483 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 WNT4P56705 351 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 TSTQ16762 297 aaKnown RBP11.68□□□□□ -0.54
PRPF39-202ENST00000424478 CDONQ4KMG0 1287 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 TEX30Q5JUR7 227 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 SATL1Q86VE3 508 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 KCNJ16Q9NPI9 418 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 NPDC1Q9NQX5 325 aaPredicted RBP11.68□□□□□ -0.54
PRPF39-202ENST00000424478 MAP1AP78559 2803 aaPredicted RBP11.68□□□□□ -0.54
PRPF39-202ENST00000424478 A1L4Q6 167 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 M0R1B8 84 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 THBDP07204 575 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 CELP19835 753 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 PSMB1P20618 241 aaKnown RBP11.68□□□□□ -0.54
PRPF39-202ENST00000424478 HSD11B1P28845 292 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 LIPAP38571 399 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 ARL9Q6T311 187 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 ZNF627Q7L945 461 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 ZNF679Q8IYX0 411 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 ZNF283Q8N7M2 679 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 OR10AC1Q8NH08 325 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 ORAI1Q96D31 301 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 DCLRE1CQ96SD1 692 aaKnown RBP11.68□□□□□ -0.54
PRPF39-202ENST00000424478 MED18Q9BUE0 208 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 MND1Q9BWT6 205 aa11.68□□□□□ -0.54
PRPF39-202ENST00000424478 ZNF878C9JN71 531 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 CNOT4O95628 575 aaKnown RBP11.67□□□□□ -0.54
PRPF39-202ENST00000424478 FAM157BP0CG42 384 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 ASCL1P50553 236 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 TIGD6Q17RP2 521 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 SNAI3Q3KNW1 292 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 SPATA46Q5T0L3 261 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 ZNF101Q8IZC7 436 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 PRSS35Q8N3Z0 413 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 OR2AE1Q8NHA4 323 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 OR1F12Q8NHA8 337 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 OPALINQ96PE5 141 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 MGLLQ99685 303 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 SCOCQ9UIL1 159 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 SLC25A15Q9Y619 301 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 METTL15A6NJ78 407 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 NGFP01138 241 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 ANXA2P07355 339 aaKnown RBP11.67□□□□□ -0.54
PRPF39-202ENST00000424478 STOMP27105 288 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 CX3CR1P49238 355 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 SH3BGRP55822 239 aaPredicted RBP11.67□□□□□ -0.54
PRPF39-202ENST00000424478 ZNF121P58317 390 aaPredicted RBP11.67□□□□□ -0.54
PRPF39-202ENST00000424478 ERVS71-1P61550 626 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 SCRN3Q0VDG4 424 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 TBCEQ15813 527 aaPredicted RBP11.67□□□□□ -0.54
PRPF39-202ENST00000424478 ARMCX4Q5H9R4 360 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 FAM57BQ71RH2 274 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 ZNF75AQ96N20 296 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 NAA50Q9GZZ1 169 aaKnown RBP11.67□□□□□ -0.54
PRPF39-202ENST00000424478 TMEM14AQ9Y6G1 99 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 NBPF19A0A087WUL8 3843 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 TGFBR1P36897 503 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 TFF3Q07654 80 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 KCTD18Q6PI47 426 aaPredicted RBP11.67□□□□□ -0.54
PRPF39-202ENST00000424478 TMED9Q9BVK6 235 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 MRPS26Q9BYN8 205 aaKnown RBP11.67□□□□□ -0.54
PRPF39-202ENST00000424478 FRRS1LQ9P0K9 344 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 CAB39Q9Y376 341 aaPredicted RBP11.67□□□□□ -0.54
PRPF39-202ENST00000424478 PCDHGB1Q9Y5G3 927 aa11.67□□□□□ -0.54
PRPF39-202ENST00000424478 TMEM269A0A1B0GVZ9 245 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 A0A1W2PPK0 400 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 TMEM129A0AVI4 362 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 IRGMA1A4Y4 181 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 MT-ND5P03915 603 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 CECR9P0C854 216 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms