RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 KLF3P57682 345 aaPredicted RBP8.89□□□□□ -0.99
USP54-205ENST00000424265 SPEM2Q0P670 501 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 PLCXD2Q0VAA5 305 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 MAP4K2Q12851 820 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 CDPF1Q6NVV7 123 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 C6orf15Q6UXA7 325 aaPredicted RBP8.89□□□□□ -0.99
USP54-205ENST00000424265 TAPBPLQ9BX59 468 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 OR51I1Q9H343 314 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 DAPP1Q9UN19 280 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 PTRH2Q9Y3E5 179 aaKnown RBP8.89□□□□□ -0.99
USP54-205ENST00000424265 LOC102724200A0A096LPH7 203 aaPredicted RBP8.88□□□□□ -0.99
USP54-205ENST00000424265 TRBV11-1A0A0K0K1C0 115 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 F6UZH7 168 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 GABRPO00591 440 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 LANCL1O43813 399 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 FAM157BP0CG42 384 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 CCL7P80098 99 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 DGCR2P98153 550 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 RAB11BQ15907 218 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 EXT1Q16394 746 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 HAGHQ16775 308 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 MESTQ5EB52 335 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 NFKBIDQ8NI38 313 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 SNHG12Q9BXW3 62 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 B4GALT7Q9UBV7 327 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 WIF1Q9Y5W5 379 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 PLPP1O14494 284 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 GSTM3P21266 225 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 SHC1P29353 583 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 IL2RGP31785 369 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 AQP2P41181 271 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 OR10A3P58181 314 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 TGIF1Q15583 401 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 NKAIN1Q4KMZ8 207 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 PRAMEF8Q5VWM4 474 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 PRAMEF7Q5VXH5 474 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 NKAIN3Q8N8D7 197 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 SENP5Q96HI0 755 aaPredicted RBP8.88□□□□□ -0.99
USP54-205ENST00000424265 FER1L6-AS2Q96M78 137 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 ZNF75AQ96N20 296 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 PBDC1Q9BVG4 233 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 LAT2Q9GZY6 243 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 THSD1Q9NS62 852 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 FBXL3Q9UKT7 428 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 LOXL2Q9Y4K0 774 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 C17orf105B2RV13 164 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 HSD11B1P28845 292 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 TAGLN2P37802 199 aaKnown RBP8.88□□□□□ -0.99
USP54-205ENST00000424265 RAB7AP51149 207 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 ARTNQ5T4W7 220 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 LRRC69Q6ZNQ3 347 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 SLC22A18ASQ8N1D0 253 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 ZNF740Q8NDX6 193 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 M1APQ8TC57 530 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 HAVCR1Q96D42 359 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 METTL7AQ9H8H3 244 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 TNFRSF12AQ9NP84 129 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 ANAPC1Q9H1A4 1944 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 TRDV1A0A1B0GX56 115 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 K7ERU9 68 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 TLX2O43763 284 aaPredicted RBP8.88□□□□□ -0.99
USP54-205ENST00000424265 ZFAND5O76080 213 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 PNLIPRP2P54317 469 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 MRPS11P82912 194 aaKnown RBP8.88□□□□□ -0.99
USP54-205ENST00000424265 ST3GAL3Q11203 375 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 CATSPERDQ86XM0 798 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 POGLUT1Q8NBL1 392 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 NUBPLQ8TB37 319 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 SGCZQ96LD1 299 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 TEX37Q96LM6 180 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 CHRNA10Q9GZZ6 450 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 TAS2R5Q9NYW4 299 aa8.88□□□□□ -0.99
USP54-205ENST00000424265 RCC2Q9P258 522 aaKnown RBP8.88□□□□□ -0.99
USP54-205ENST00000424265 NYNRINQ9P2P1 1898 aaKnown RBP8.88□□□□□ -0.99
USP54-205ENST00000424265 C5orf51A6NDU8 294 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 CD1CP29017 333 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 LIM2P55344 173 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 MRPL49Q13405 166 aaKnown RBP8.87□□□□□ -0.99
USP54-205ENST00000424265 GAS6Q14393 721 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 RGNQ15493 299 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 GXYLT1Q4G148 440 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 FAHD1Q6P587 224 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 KDM8Q8N371 416 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 CMBLQ96DG6 245 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 WDR89Q96FK6 387 aaPredicted RBP8.87□□□□□ -0.99
USP54-205ENST00000424265 SLC46A1Q96NT5 459 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 OR2W5A6NFC9 320 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 MBPP02686 304 aaPredicted RBP8.87□□□□□ -0.99
USP54-205ENST00000424265 GABRA3P34903 492 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 SULT1A1P50225 295 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 CSRP3P50461 194 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 S100A10P60903 97 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 ID2Q02363 134 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 TMED4Q7Z7H5 227 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 SLC35G3Q8N808 338 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 OR4K17Q8NGC6 315 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 OR5D16Q8NGK9 328 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 KIRREL1Q96J84 757 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 TUBB1Q9H4B7 451 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 PUS1Q9Y606 427 aaKnown RBP eCLIP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms